Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: ON674118
Parameters: 2 7 7 80 10 50 500
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 500
Length: 272274
ACGTcount: A:0.27, C:0.23, G:0.24, T:0.26
Found at i:35005 original size:13 final size:13
Alignment explanation
Indices: 34987--35012 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
34977 GGACGAGGAC
34987 TCATGTTTCTGAG
1 TCATGTTTCTGAG
35000 TCATGTTTCTGAG
1 TCATGTTTCTGAG
35013 ATTGATTGTT
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.15, C:0.15, G:0.23, T:0.46
Consensus pattern (13 bp):
TCATGTTTCTGAG
Left flanking sequence: Indices 34487 -- 34986
AGGATGGTACCTATAAAGGTATAGGCACCAGTTCATTCAGTCAATGAAGCTGCAGTCGGTTCTGA
TGATTATGCCGTTGATTCGGTAGATGAGTCAGTCGGTTCGGAAGTTGGTTCTCTTTCTCATTCTG
CGGCGAATAAAGGAAGAGAAAGGGCTTACTAACCCCTTATTTGTACGATATGATGCAAGCAAGGA
ATCTAGCCTATAAGAGTAAACCACCTCTCTTTCCTCTTGTAGCTAAGGAAAGCGATTTCAGTCAA
GATCCAATCCAGGTTTCTTGTTTTCATTGATGTCTAATTCGAGAGTAAAGAGCTACGAACTGCTA
ACTCGAAGAAAGAGAAAGAATTCCTAGACCGGGAATGGAACTAGTGAAGGCTGCTATGGAATCGA
ACTCTTGGAAGACAGAGATTCTATACCATTCTCTTCTGTATGTGAATCAGTACGAGGATTTCTGA
TCATTATTCGTTTAAGCAAATTCTCCGTTTCTTGAGGACGAGGAC
Right flanking sequence: Indices 35013 -- 35512
ATTGATTGTTAGGTATCAAAAGTAGCTTCTCCTGCTGCTTCTGAGCTGGCAGTTCCTCTTTCTTA
CTCTAATTACCTGCTTTAGTAGATCTAGAATAAGCAGCTGCCTCATCTATATAAATCAGTAAGAA
CAAGAACCATGAATCTCACTCTTTGCATACAATAGTTTGCACGAGAATCCTCCGTCTTTTGAATG
CCAGTAGCAAGGGCGCTGTCTGCCTGCTCTCATTTTCCACCCCTAACCCTAAGGGCATTCGAAAT
CCATGTGTTAAGCAAATAACAAGCACACCGGTTTCCTTGACCGGGTTTAGACCCATTTGATTCTT
ATACTCCCAGGAAAGAGAGGAACATCCACTGATTTAGGATCGCAGCCTTACGAATCCATACTGAC
ACCAGTTGGTGTTTCAAGCGCTTCCACTAGCTGTTTAACATCAAGACACTGATAACAGGGAATCT
CTCGTCATTAAGGCTTATTATTTCCAGTTTCTCTGGTCTCCTTGG
Found at i:45555 original size:15 final size:15
Alignment explanation
Indices: 45532--45565 Score: 50
Period size: 15 Copynumber: 2.3 Consensus size: 15
45522 AAGTGGACAA
*
45532 TTGATAGTGAGGGAG
1 TTGAGAGTGAGGGAG
*
45547 TTGAGAGTGGGGGAG
1 TTGAGAGTGAGGGAG
45562 TTGA
1 TTGA
45566 AATGCACCTT
Statistics
Matches: 17, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
15 17 1.00
ACGTcount: A:0.24, C:0.00, G:0.50, T:0.26
Consensus pattern (15 bp):
TTGAGAGTGAGGGAG
Left flanking sequence: Indices 45032 -- 45531
GAGACTTTGAGCCTTTCATCGGGCTTTCACCCCTTGCCATACTGTTACAGGGTGATCCCTCTCCT
CTACTGCTTAGGCTACGCTTGGAGTAGACTAGACGAATAGCTTTGATTTGTTTATACTAAGCTAT
ATCACCCATTCGATCAAAGAGCCTGTCTAGTATTGACAATCATTCCGACGGAATTTCATATTGCA
TGAACCAAATGGAGCACTCTCCGTTGTAGATCTTCAAAGCTTATCATTGGTTCAATCTTGATGAG
CAAGAAGATGTTTTCTAGACGAATGCGAAGATGACAGAGCTTGGAGTTTCCCACTCAAGGGCTGC
TCGTCCTAAGGGATGCGCTCTATTATTAACATATTCTAGTAGTGCGTTAGAGCTCTCTTTGGGTT
CATCTTGAAGAGAGGTTCAATCCACCTCAGCATAAAAAGCTATGTTAACTTCTATATACCCCATT
TGTCCCTGATAATGGAGATGGACCTGGATAATGGAAAGTGGACAA
Right flanking sequence: Indices 45566 -- 46065
AATGCACCTTTTCTCTCTCTGGTGTGTACCTTCAGGTGTCAGAAGAGTCAATAAAGGATACATTC
AACTCCCTTTGGTTGATATTGACCTTGATTCCATCTTCTCTTCTATTCCGTTGAAGAAAATGCGA
TAGAACTCCCTGAAATCACCGGCATTGGATTCCGCATCAACCAAGTTAGCGGGTGGCTTTTCAGG
CCCCTCAAGCAGGCTATTCTGAAAGACACAGGATGGGGCAACTTGGAGGAAACCGTTAGTGTTAA
GAATAGATTATCACTAGGAAAGAGCTATCCTCCATTGAAAAACAATAGACTGTTTTTCTATATCT
TTAGACAACTAGAACAAAGTTTACTTGTCTGAACCTGTTAGGATAGCAGCACCATCTCCCAGGTA
ACTCCTGTCTATAGGTTGACTACTATTTCTTTACAGATCGCATCCGTAGAGGGCATGCGGCGAGG
TAAGAGAAATAGGGAGTCAGGAGATAAGAGCTAACTAATACAGAA
Found at i:49714 original size:9 final size:9
Alignment explanation
Indices: 49700--49724 Score: 50
Period size: 9 Copynumber: 2.8 Consensus size: 9
49690 TGTTCCTTCT
49700 TCATTGAAG
1 TCATTGAAG
49709 TCATTGAAG
1 TCATTGAAG
49718 TCATTGA
1 TCATTGA
49725 TCATAGTCAA
Statistics
Matches: 16, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
9 16 1.00
ACGTcount: A:0.32, C:0.12, G:0.20, T:0.36
Consensus pattern (9 bp):
TCATTGAAG
Left flanking sequence: Indices 49200 -- 49699
GCGCTAAATTCGAAAGAATAGCTCGCGTTAAGAACCAAGGTATGGGAGGCCTATACAGATAGTTG
GGGGCCACTATACATAGCATTAGTTAGATATAGCATTGGCTAGTATAGGGCAGGGGGCAGGATAA
GGAGAATCCGCGTTCTTGGTAGGCCTATAAAAGAGGTCCCCGTCCGTCTACGTTATGAATTCCAT
GGGTAACTGCGGGCGCTATGACTCATACTATAATGCCAATCAAACACTGGCTAGATGCTCAACGC
AAGCATCTCTCTCTGCAACAACTGGTCCTGAAGCTTTCGAATCCCGGGGAACTGGGCCATAAGAC
CTAGAAGTTCCGACAGAGTTAGCATACGTAACAACAGATGACACCAACTCCACCATCCCAGGGAA
TCCTCTTCCAGAGAGCGATGCCTCAGAAAGGGAAATGGGCAAGTTCGAATTAGGATGTGAGGCAG
GAGGGCTTCTTCTTGAAGAGAAGATCAGTCGTTGATGTTCCTTCT
Right flanking sequence: Indices 49725 -- 50224
TCATAGTCAAGTAAAGAGAAGGTAGCAGGGTTGTGCCACCATCCTTACCACTCCCGATGAGTGAT
AAGAACTTTACTAACCGCCTAGGGAATTCTCTTTAGGACCAGCCGATCTCTATCTATCGGATGCA
CCGGTACGCAAATAGTTGGTACATGAAGCCACGTCTTAAAACAAAACCTATGCTCAAGCCAACTT
ACGACTCGTCCAAAGCTTCTCTCCATTGGATGGCCGACTGGTTCCATTATCATGGATCCACTTGC
TTCGAGGCCCTGTCCAGCCTTCTCTTTCTTATCCAATATCTTTTAAAGAAGCATCTTTAGAAAGA
GGGGCCACGCTAGCTTCGGTCAAAGGAATGGGTTTTTATCCTTTATCAAATGAAAAACCTGATCC
TAGCAGAGACCTGCTATATACCTTAACACAGGTGGGCTCCACTTTGTCGTCTTCTTCTCGAACAA
ATGGTGAATCTGCTACTACTGGATAAAGTCCATAGGTATTGGAAT
Found at i:65306 original size:3 final size:3
Alignment explanation
Indices: 65300--65330 Score: 53
Period size: 3 Copynumber: 10.3 Consensus size: 3
65290 CGACGATCTT
*
65300 GGA GGA GAA GGA GGA GGA GGA GGA GGA GGA G
1 GGA GGA GGA GGA GGA GGA GGA GGA GGA GGA G
65331 CTAATTCGGA
Statistics
Matches: 26, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
3 26 1.00
ACGTcount: A:0.35, C:0.00, G:0.65, T:0.00
Consensus pattern (3 bp):
GGA
Left flanking sequence: Indices 64800 -- 65299
AAAGAACATGACGGAACGGAACCTAACAGCAATTGAAGCGCAATCCATTAGTGAATTAGTTGCGG
CCGGCACTATGAAATGAAAGAGCAAGAGCAATAACTATTGAATTGCGAGTTGAGGCCCTAAATCC
ATTAAAGAGCAATTCGTTAATAAACGTCAAACCCTAAACTAACGAATGAATTTCATAGTTTAGGC
TCTTGCTGGAACGGAAGAATTATTCATTTTATTTTTTAAAAGGCTTCAAACCAAGAGAAGGACTG
TTTTCACATGCCACAGTTAGGACTTTGAAGTACGAGACTGACTGAACTCGAACTTTTTAAAAAAA
TGGACTCCGTATAGTCTGTACCGGAGTGGTTCATCGTCAAAAGAACAACAATTGGTTGTAGCATT
TCCATTCATGTGATGTAAAAGAGGGCTTTCTCGTCTCGCAGGCAGGGCGGAGCTTTCTCACTATA
CAATTACCACATCTACGAATATTGCGAAGGACCAACGACGATCTT
Right flanking sequence: Indices 65331 -- 65830
CTAATTCGGACTAGATGGAATGATTACGAGAGAGACAATGAGACAAAGCCTACAGGGGAGAGCAC
TTAGACAATTCACTTTGAGTACAGGGAAGTCTGCTGGGAGGAATTCCTCAGGGCGTATTACGGTG
TTTCACCGCGCTTACAGACCCTTTATAACTCAAAAAGTGTATGCCGGTCTGCCTGAATTGGATTC
TTCGTCCTCTTCTTCGGAAGAAGAGGAAGAAGAGGACGCTATGTCTTCGGATTCAGAGGGAGAAG
TCGATGCGCCTGTCCAAGAAGAGGGGGGGGGCCGGCAAGTGGATCATCCCCTTCGCGCCCAGAAT
GTCGAACAAGAAACCTCACTGTTTTCGGATATCGAAAGGTTGCGGCGATACTCCGACAATGGGGC
AAACCCCTTTCGGAATTACTTGAGGGGTGAGCCTTCGGAGTATCCCCGGAGCGTGAACGGCGCCC
TGGACGAAGCCGCGACGACTGGGCCTCGGGAATATTCTCGCCAAC
Found at i:69890 original size:24 final size:24
Alignment explanation
Indices: 69860--69907 Score: 80
Period size: 24 Copynumber: 2.0 Consensus size: 24
69850 CTTACGTACG
69860 AGAGTTCAATCTAGAGCT-AGAGTC
1 AGAGTTCAATCTAGAG-TGAGAGTC
69884 AGAGTTCAATCTAGAGTGAGAGTC
1 AGAGTTCAATCTAGAGTGAGAGTC
69908 TTTACCGCAA
Statistics
Matches: 23, Mismatches: 0, Indels: 2
0.92 0.00 0.08
Matches are distributed among these distances:
23 1 0.04
24 22 0.96
ACGTcount: A:0.33, C:0.15, G:0.27, T:0.25
Consensus pattern (24 bp):
AGAGTTCAATCTAGAGTGAGAGTC
Left flanking sequence: Indices 69360 -- 69859
TGAGAAAGGGTATGATATTCTTTCTTCAAGAAAGGAGATAGTCTTAACAGAATGAGAAAGGAGAT
AGGATAGTTCCCTAGTTGGATGGAATGAGAAAGCTAAGGAAGTTCCCGATCTGACTGAAAAAGAG
AAGAAAGCTAAGGCACAGTTCCCTTTCCTCTGAGAGGTTTAAGGAAATTCCCAGCTAAGGCAGTT
ACCTAGTTGAAACGAGAGGTATTTGATGACTCTCTTTCCTCTCTAAGAAAAGAGAGAGACAAAAC
AAACGAGAAATCTCGCCTTTATAAAGCAAGCCTTAAGTATTAAATAAGTGAATACGCCAGCGGGA
ACTTTAAATCTTTCGCTTTCTTGGCGAGTGTTCGTCTATCAATGAATGGAATCGGTAAAGTGGTC
TCGGCGGTTCGACTGCTTTGTTCTCCACGCCTTCGTTCATTTGCCAACTTTCTGACTGCAAAAGC
CAGTCCGAGGTTGGAGTTAGAGTTCCTATCAGGGCCTTACGTACG
Right flanking sequence: Indices 69908 -- 70407
TTTACCGCAACTGAGTCACTCAGTTATTTTCTGAGTCACTTAGGCAACTGAACTTGTGATTCCGG
GTAACCGCATCGGATTCAGGGAGAAGGGTTCATCCGCTTTCCGTTGATAGCTACAAAGGCGTGGC
TACTTCAACTTCCCACAGGTGAGTGGCTTACACATTAGATGCCCCCCATCTACTCCTTTTTCAGA
ATGGAGAAAGAATAGAATTGTGGATTTGGGAACTCAAAAGGAATCCTTTTCGTCATAGTAAGGTC
TCGCTTGGACTGTCCTACCCGGTATTGGCCGGGACTCTAAATACGAGAGCAAGAGTGGGAGGCTC
CTGAATAGCTTGCGAGTGATGGTCTTTCTTTCAAAGTGAAATTCTTTACACTTTTTCAATCTTTT
AGGTACGCTATTTATATATATTAACAGTTGCCGATCGATTTAAAATAGTAGGGCTCATAAAGAGG
ACTTAAGTTAAACACTATCACAACAAAGAATAGAGCCATTTAAGA
Found at i:76912 original size:32 final size:32
Alignment explanation
Indices: 76848--76912 Score: 96
Period size: 32 Copynumber: 2.0 Consensus size: 32
76838 CTGGAGTCTC
*
76848 GTATCTGATTGACTCTCTCAAGATCCGTTTTT
1 GTATCTGATTGACTCTCTCAAGATCCGCTTTT
*
76880 GTATCTGATTGGA-TCTCTCAAGATCTGCTTTT
1 GTATCTGATT-GACTCTCTCAAGATCCGCTTTT
76912 G
1 G
76913 GTGCTGCTAG
Statistics
Matches: 30, Mismatches: 2, Indels: 2
0.88 0.06 0.06
Matches are distributed among these distances:
32 28 0.93
33 2 0.07
ACGTcount: A:0.18, C:0.20, G:0.18, T:0.43
Consensus pattern (32 bp):
GTATCTGATTGACTCTCTCAAGATCCGCTTTT
Left flanking sequence: Indices 76348 -- 76847
ACGGCGGCTATCCCGAGCTAGCCATCCATAGTTGTCAGCCTCCCTTACCCACAACCCTCACCTGT
GACCCTCACTGAAATTCAATTCAATGAAAGGCGGACCCCATAGAAGTAAGCCTGAGCCAGCTCAG
TGAAGACTTCTCAAATACCATCCAGCCAGACCCTTGAATAGCATGTATAAGATTTAAGATTAGTC
CTGGCTACCGTGAGCATGAATTGTATTTGAAGCAGGAAAAATGAAGCTTCGCTTAGACAGAGATT
CCGTTTTTGGGACATCGTATTGGGCACGGACAGGTTGCCAGAAAGAAAAGTCAAGGCTATTCTTG
AGCGGCCTACGCCCACTAAGGTCACTGAATTGAGATCTTTTTCTTTTGAGAAACCGGGGTTGTAT
GACTAGCTTATCCGGCATATGATCTTAGTCGATAAGATAGTGAGAAAGTTGCTAAAAGTGACTTT
CTGTGAGAACTCTCTTCTTGATGATCTGTCTTTTACTGGAGTCTC
Right flanking sequence: Indices 76913 -- 77412
GTGCTGCTAGCTCCGCCCGTTGAACCAGCAAACAATTAAGGCAGCACGAGCTGGGGTGGTCCAGC
AACAGCGGATGTTGATATCACTGCATCGTATAGCACATTTGGTTAAGCAGTTGATTCAGTAGATT
CTGCGTGCGAAAGTAGACTTTGCACCTTGCGCACCATACGAAGCTCCATTCGGATTACTGGGGAC
TAGTTGGATTTGAGTTTCCGCGGATTTTTTAGCCCGCCCGCCAACCTATATAGGGCCGAACATGA
GCCCGGATTCGTCTCAATAGCTCTCCGAACCAGTGCGAGTGCGTAGGGATCGGAATGAAGCGTAA
ATAAATAGGTGGGTTCGGGCAGCAGTTTTTTAGTTATCGATCGATCATTGAGAACTAGTCTCCAA
GTTTCGAGATGCAGAGGTTCAAGCATTCAGTCCCATCTATTGGTCCAGAGCCAGTTGACCGAGCT
AAGATAGCAGCAGCCAGCATGGCTGGAGCGGGGGAATGAGAAGAA
Found at i:92446 original size:28 final size:28
Alignment explanation
Indices: 92406--92459 Score: 99
Period size: 28 Copynumber: 1.9 Consensus size: 28
92396 GACAAGCTTG
*
92406 ACTTATAGTTAATTCCAAAGAATTGGTC
1 ACTTATAGCTAATTCCAAAGAATTGGTC
92434 ACTTATAGCTAATTCCAAAGAATTGG
1 ACTTATAGCTAATTCCAAAGAATTGG
92460 GCCTGGAATC
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
28 25 1.00
ACGTcount: A:0.37, C:0.15, G:0.15, T:0.33
Consensus pattern (28 bp):
ACTTATAGCTAATTCCAAAGAATTGGTC
Left flanking sequence: Indices 91906 -- 92405
TTATGTCCGTTACGGTCGGCCCTATCTTTGGAGAATGCCTTCCCTCCACTCACTCGTCAATTCAT
TAGTCTCCAACTCAAATGAGGGGAGTAGGGTTGACTCCGGTCCCTCCTCCTAAAGGAAATGAGCG
ACATCTTGTACGATGTACGTCCTGGCCGCTTGCAAGCGCTCGCTTTTTCAGGTAGACCGGGGAAA
CTGCATATGATCTCCCGCGGCATGCGTGAATGTGGTAGCTCGGAAACTTCATTGCCTATTTTTGA
GTTTTTTGCGTTCCGCTTGCCATCTCCCCGATTGAATAGATAGCTCCTGCAACGCTCGCTTCACT
CCCAGCATTGAAAAGAGGCAGCCTCATGTCAATCTGAGCTCGCCCGGAGATCGTGAGTTCTTTAG
CTGTTGCGAGCTCCTCGCTTTCCGCTAGACCCGCCCTCTAGCTGTAGAAGCTTTTCGGATCGTTC
CTATCGAAAGAAGAAGTTCGAAGCCTTTGATAGTCGACAAGCTTG
Right flanking sequence: Indices 92460 -- 92959
GCCTGGAATCCAATGCAACCTTCGACCGACCTCTCCTGGTGACCCGACAAGGTAAGCAAGTGAAC
CTCTAGTGGCGGCATCTAAGCTATCAAATTCCTCTATTCAACTCCCTTCAGAGCCCACATCTCCA
TGTCCTATCAATGCGGTCCCTAGCGAGGAACCGGAACCAACTAATGGATCCATGGAACCTCTCGC
CATATATTGCATCTCCAACGGAAGGTAAGAAGCTCCATCCGAGGGAAGATAAGCCATCTCCGAGA
CCATTCCAGCGAATGAACTAATCCCTTTCGAAACCTCTTATCGAGATCCCCATCTCCTGCAAATT
ATTCATCTGGTGGCGAAGGGCGACTCCACCTGCTAAGCAGGAACTACCAAGCTTTCTATTCCCCA
GGGTACTCGCCTACACGTGCACTTCCTTCAAGTTCAAGGCTTGGCAAATAGGCTTCTCCATACGC
CTAGCTATATACTAAATCAAGTAAAGGACTATTATCAGCTTAAGC
Found at i:103247 original size:24 final size:24
Alignment explanation
Indices: 103220--103267 Score: 69
Period size: 24 Copynumber: 2.0 Consensus size: 24
103210 GCTACTTAGA
103220 TAGACGAATTAGCTCCTAGACTGC
1 TAGACGAATTAGCTCCTAGACTGC
***
103244 TAGACTTCTTAGCTCCTAGACTGC
1 TAGACGAATTAGCTCCTAGACTGC
103268 CTTACTTGAC
Statistics
Matches: 21, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
24 21 1.00
ACGTcount: A:0.25, C:0.27, G:0.19, T:0.29
Consensus pattern (24 bp):
TAGACGAATTAGCTCCTAGACTGC
Left flanking sequence: Indices 102720 -- 103219
AGCAAACTATCTATCGTACCCAGTTTATCCTTCAGTGAGCTACTTAGCCACTCCTGCCCTTGTTG
CTTCTTTATATTTAATTAATCTAAGGACGGATACTTGTGAGCAAACTACCTCTTTCTCGCCTCAT
ACTTTCAGACCGTCTCTCTTCTTCCCCTCAGACTTTCCTATCTTTATAACTAGACTAGAAAGCCT
ATTCTTTCACTCCGCCTTCGACTGCTAACAACCTGACTTTCCCACTGAGCTACTAGAGTACTGAA
CTTCCTAAACCGGCTCTTGCTCACTAGCCCACTGAACGAAGTATGCAAGCAACCTGAAGCTGAAA
GATGAACTAATCTTTAGTCTTCTAATCCTATCCTTATACCTGACTCGCCCATGAGTAAATAGTGA
GATAGCAGCCGCCCTTTCCTCTGATTCAGCTTACTCTATTTGAGATTCGAAAGACTATCGAACTT
GAGCAACTTACGTACCTAGATATCTTGACGGGTGAGCTACTTAGA
Right flanking sequence: Indices 103268 -- 103767
CTTACTTGACTGGCTTTACTTGATTCTCACAGGCCTGTTTAGTCAAATAGAAGAGAAGCCCCCTA
CTGAGACTGGGCTTCGTTGCCCCGCTCCTGAAGCCTATAACTCGTTCTATGAATCTAGCCTGCAA
TCCTTTCTATCTTCTCTACTGCTTTCTTCGCCAAAAACGCTTCTCTCGGCCTGATTCCTGATTGA
ATATGCAAATATAAGATTGCCTTGGCTCTTGGCTGGCTTCGGCATATTTGCTTGGCTTGCGAACC
TAATATGACTATGACTATCAAAATCTTGTTATGCCTCTTCGGTTGCTTAACTAAAGAACGTTGTA
TTGCCACTTACCTTTTGTACTAGCGTGAGCGTACTTGTGTGTTAAAGGAGTACTTTATTTGGGCT
GCTAAGTAGAAGTAGAAGCTATAGGCGAAGGCTTTCGCGCCTTGCTCTTAAGTAAGGTGGAAGCT
AGCTACTTGCTTCTTAAAGGTGCTTGCCCGCGGCTATTCGTAGAT
Found at i:141614 original size:39 final size:39
Alignment explanation
Indices: 141559--141637 Score: 149
Period size: 39 Copynumber: 2.0 Consensus size: 39
141549 CCCATCCTTC
*
141559 AATATCATGATTGGGTCGACCAGGCCAGATCATGAGTGA
1 AATATCATGATCGGGTCGACCAGGCCAGATCATGAGTGA
141598 AATATCATGATCGGGTCGACCAGGCCAGATCATGAGTGA
1 AATATCATGATCGGGTCGACCAGGCCAGATCATGAGTGA
141637 A
1 A
141638 TAGAAAATCG
Statistics
Matches: 39, Mismatches: 1, Indels: 0
0.98 0.03 0.00
Matches are distributed among these distances:
39 39 1.00
ACGTcount: A:0.32, C:0.19, G:0.28, T:0.22
Consensus pattern (39 bp):
AATATCATGATCGGGTCGACCAGGCCAGATCATGAGTGA
Left flanking sequence: Indices 141059 -- 141558
AGTAGTCGGTCTAGCTCTGAACCAGCAAACTCCGGCTTGAAAGCAGCAAACTACTTCGCGGGGCT
TAGTCAAGTTCTGAATTAGACTGAAAGGGGAAGAAGCATACTTCAAGTTAGCACTACACCTATAA
AGTCAAGCAGCTTTCATTCTTTATAGTTCCGTTCCGCGCCCTCTTTCTTTGACTTGGACGCGCAG
AAAAGATCTCGCCTATAAACCAGAATAATAGAATTCCTTACCCGACCTTATATAGTCAAAGGCGA
AGGTGGAAGGGGAATGTGACGCCTTCTCATCTCGGAGCTGACTCAACCACAAATCTGTTGAATGA
AGGTAGCTTGCTTACTCTCAGCCACTAGTTAGAAGGAAATCCCTTGACTTCGCTTATGCTCAGTC
AAGTGAGGCGGGCTAAGATTCCATTCGAAGTAACGTAACAGGATTCGATGTTGCACCATCTTCCA
CTCTTCTCGGGATCCGGAGTTTTTCGAGAAAAGGTCCCATCCTTC
Right flanking sequence: Indices 141638 -- 142137
TAGAAAATCGAAAACGTACATAGCAGTTCCAGCGGAAATACTTGGAATAATTCTACCACTTCTAC
TAGGAGTAGCCTTTTTAGTGCTAGCTGAACGTAAAGTAATGGCTTTTGTGCAACGTCGAAAGGGT
CCTGATGTAGTGGGATCGTTCGGATTGTTACAACCTCTAGCAGATGGTTCGAAATTGATTCTAAA
AGAACCTATTTCACCAAGTAGTGCAAATTTCTCCCTTTTTAGAATGGCTCCAGTGGCTACATTTA
TGTTAAGTCTGGTCGCTCGGGCCGTTGTACCTTTTGATTATGGTATGGTATTGTCAGATTCGAAC
ATAGGGCTACTTTATTTGTTTGCCATATCTTCGCTAGGTGTTTATGGAATTATTACAGCAGGTCG
GTCTAGTAATTAGGGGGGGGGCGGCCGTTCGGTCGCCTATGATACTAGGACCAATGGGTCAAAAA
TGGGTTTGTGCCGCAGGTGTTGAACGATCTACTCTACACAGGTGT
Found at i:156808 original size:18 final size:18
Alignment explanation
Indices: 156787--156829 Score: 54
Period size: 18 Copynumber: 2.4 Consensus size: 18
156777 CAACCTTGTT
156787 GACTATGACAACAG-TCGC
1 GACTATGA-AACAGATCGC
156805 GACTAT-AAACAGACTCGC
1 GACTATGAAACAGA-TCGC
156823 GACTATG
1 GACTATG
156830 GCAGGGCTCT
Statistics
Matches: 22, Mismatches: 0, Indels: 5
0.81 0.00 0.19
Matches are distributed among these distances:
16 5 0.23
17 1 0.05
18 16 0.73
ACGTcount: A:0.35, C:0.26, G:0.21, T:0.19
Consensus pattern (18 bp):
GACTATGAAACAGATCGC
Left flanking sequence: Indices 156287 -- 156786
TACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGA
GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTAC
CTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCTTATAACACTTCT
CCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCACTTAGCAGAGT
CCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAATCAAAAGATAGGA
GAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTCTCAAG
CGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGGGTACGGTCAGTTCACCGGGAGGAT
CGCCCTCCCAATTCGAAGTTTTTTCCTGGAAGTTTCAACCTTGTT
Right flanking sequence: Indices 156830 -- 157329
GCAGGGCTCTAAGCTCTGCTCTCTCGCGACCCCTACTCTAATCAAAATACTAAAGGCCCCCTTAC
GTGATAGGGCGGAACGTGACGGTACGGAATTTGAACGGGGGAATAGTCAAAAGGCGAGCACTGAA
ATGAGAAAGGCTTGTAGACTCGTGACGCGATTCGAACAAGCCGGAACGCGGGACGTTCCTTGGTG
GTTCACACTAGAAAGTGCTTCGAAAGGGCAGGTGCGCGGAGCCGGAGCCCGGCATGTTCGCCCGC
TGGGCCGAGTGTTCGCCCACTTCAGAGTCTTCGCCTTTAGATAACTCAAAGTGTCCGCCTTTTCA
AATAACAAGCCCTTTATCGAGAATTGAGAGTTTCGCCTTTTGAAGCGCCAGTAGCGTAGGGCGAC
CGGGCCAGGCCGAGTCAGAAAGGCTTTGATGACTCAAGGTTCATATTAGGGAAAGGAGAGCGAGG
GGAAGCCTGACGGAACTACACCTATGCTTCTTTGTTAGGTTCCGT
Found at i:167574 original size:16 final size:16
Alignment explanation
Indices: 167553--167609 Score: 114
Period size: 16 Copynumber: 3.6 Consensus size: 16
167543 AATTGCTCTT
167553 TAATGGATTGCGGCAC
1 TAATGGATTGCGGCAC
167569 TAATGGATTGCGGCAC
1 TAATGGATTGCGGCAC
167585 TAATGGATTGCGGCAC
1 TAATGGATTGCGGCAC
167601 TAATGGATT
1 TAATGGATT
167610 TAGGGCCTCA
Statistics
Matches: 41, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
16 41 1.00
ACGTcount: A:0.26, C:0.16, G:0.30, T:0.28
Consensus pattern (16 bp):
TAATGGATTGCGGCAC
Left flanking sequence: Indices 167053 -- 167552
GGATTCTTTTTTTACCCCCGCATGCATATAGTATCATAAAAAGAAAGATTATGTATGTCCAATTT
GAATCGATCTCAATTGATCCCTCGTGACTGCCCAGAGGAGAAGTAATAGGTAGGGATGACAGGAT
TTGGATTTTGTACCCAAAACAAAGGCGCTACCAAGCTGCGCTACATCCCTTTCAATTGGTCTACA
GTGTCATTGTAGAGAATCCCTGTTTTCAAAATCGTTATTTCATCCATTACCCATTTTTCTTGCTT
GGTCTCATATTTTTTTATATACTCATCATCATCCCGCCGCTCCTACCAACGATAATAGAAGTTTC
GAGGGTTTCCCGATATAAATATTTGCATGCGAGAGAGATCCCAATTCCGTGTATCCGGTTAAGCA
AGCCCTGCCGCCAGCGCCAGCTTCCACCCAGCAAACTACTACGCAAACGGGCCGAAGAAACAAGA
AAACGCAATTCGTTCGCTTTTGACGTTTATTAACGAATTGCTCTT
Right flanking sequence: Indices 167610 -- 168109
TAGGGCCTCAACTCGCAATTTCATAGTTATTGCGGGTTGAAGCTAACGAATTGCTCTTGCTGGGT
GGGCCTCAAAACCAATGATCTGCCCAAACGAACAAACAAGCAATCTAACCCCGGCAACTCCTTCT
CTCTTTCCGCCAGCCAGGGACCAGGGAAAGCCCGCGGAAGGCCAATGCAGGCTCTAAACCAGATA
TTCCAACATCAACCCCAGCTGATAAACAACCCAACGAAAGGAATGAAGCTGAACCATCGATCTCA
TCTAATGCCTTTGAAGCCCCGCCCTTGACGGAACGTAATTAAAAAGCTTCACTCATCTCCAGATC
CTCTAGCTGGGCATCTATCCGATGGTTGCGAATACCGTTATCTCCTTCTGCTTGTTCCGGTGCCC
ATCCGAGGGAAGTCATTCTTTATCTGATACAGATGCCCATCAACCACCAGTGGGAGAATAAAATG
ACCTAGATTCGACTCCATAACCTGTTTTCCCCCCGAAGGGGAAGC
Found at i:172890 original size:18 final size:18
Alignment explanation
Indices: 172862--172906 Score: 72
Period size: 18 Copynumber: 2.5 Consensus size: 18
172852 CAGATCCTAA
*
172862 TGGGCTGCCTCCTAATGT
1 TGGGGTGCCTCCTAATGT
*
172880 TGTGGTGCCTCCTAATGT
1 TGGGGTGCCTCCTAATGT
172898 TGGGGTGCC
1 TGGGGTGCC
172907 AGGTTGTGAA
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
18 24 1.00
ACGTcount: A:0.09, C:0.24, G:0.33, T:0.33
Consensus pattern (18 bp):
TGGGGTGCCTCCTAATGT
Left flanking sequence: Indices 172362 -- 172861
TTCAGAACCTCTTCTCCTTCCTTTCGTTGAGCAGCCTCCACGAGAGCTAGATTTGCCTCAATTCT
TTCTCTCTTGCCGACTCGAATCGATGTGACTTCTTCTGCTGCTTATTCTCTAGTTTCCTTCCTTA
GCGCAAGCAAGCACTAAGCCCTTGAAAATGAGTATTGAAGACTCTTCTTTGTGAAAGATATTTCA
TAAGCTTCAAATTGGTCAACAGAGGCTAATGCACTATCTCCAGACTATCGAAGATGAAAGAAACT
CTTGAGACTAGAGGATACGAACCCGAAGAAGCGATCGATTAAAACCGGTCTACGGTAGCGAAGCG
AACTCTTTACATAACATAAAGTGAGACCTTCATCGAGCACCAAAAGCAGATCTTGAGACTTTAAA
TCAGATCCGCGAATAAGAGATGCACATATCAAAGAAAGAGAAAAAACGTCTTCAATGATCGAATA
GCAATAGGTGTTAGAAAATTCTCATGAACCGTATGCAGATCCTAA
Right flanking sequence: Indices 172907 -- 173406
AGGTTGTGAATTGTAAACTCTCCGTTCCTTCTTGACTCGCCTTCAGTCTTGATGGCTGCAAGCGA
AATGACAGCTGGCTATGTGACTAGAAAAGAAAGTCAGAGAGGCACGGGAAAAGCTTTTAAAGAGC
ATTCTTCTCCCTCGCTTCCTCGAGAGTTGGATCTTCTGTCCCCTGATTTATATCAGCAAGTTCCC
CGGTACGACCTCCGAAATCGATGATTCTTGGTCATTCCTATCATTAGATTCACACAAGTGATAGA
TGATTATCAACGTGATGCGGAATTCCATTCCCTGATGTAGTTTATGCCCCCCACTAACTACCGCT
TTCCGTTCTTGGCTGACAGCGGAGGAGAGAGGGAGGACAACCTTCCTGTTGTGTTGGAGCCTTCT
CCGCCCTTACGGATTCATACCGCTAAGGAAAAGCTCAGGATTGAGTTTGAGCCTTTCTCCCTACT
CTTTATTAACCGGAATTGCTCAACGCAATAGATAAAATGACTAGA
Found at i:204541 original size:19 final size:19
Alignment explanation
Indices: 204517--204555 Score: 78
Period size: 19 Copynumber: 2.1 Consensus size: 19
204507 AAGAAGCGTT
204517 ACATTCACTATGAATAAGA
1 ACATTCACTATGAATAAGA
204536 ACATTCACTATGAATAAGA
1 ACATTCACTATGAATAAGA
204555 A
1 A
204556 AGCGAATGCA
Statistics
Matches: 20, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
19 20 1.00
ACGTcount: A:0.49, C:0.15, G:0.10, T:0.26
Consensus pattern (19 bp):
ACATTCACTATGAATAAGA
Left flanking sequence: Indices 204017 -- 204516
CTGTGAAAGCCTAGAAAAATACATGCCCAGTTGAGATGTGATATGATTGCATCGCGGTGCCTAAG
TACACGATCTAAGAGATCATTGTATCGAGTCGTTGGATCATAGTCTCTTACCATAAAAATGGCTG
CATGCGCAGCAGCACCAACTATGAGAAATCCACCGATCCACATGTGATGTGTGAACAACGAAAGT
TGTGTACCATAGTCAGTAGCTAGATATGGATAAGGGGGCATGGAATACATATGGTGAGCTACGAC
AATGGTTAAAGAGCCTAACATAGCTAAGTAAAGAGATAATTGAGCATGCCATGAAGTTGTTAGAA
TCTCATATAGGCCTTTATGGCCCTGGCCAGTAAATGGTCCTTTATGAGCCTCTAAAATATCCTTT
AGGCCATGACCAATACCCCAATTGGTCCCTCAATGCAGCTGTCACATCAGATATCACAAAAATCA
AAGAAATAAAAGAAGAATAAATAAAAGAAAGAAGAAAGAAGCGTT
Right flanking sequence: Indices 204556 -- 205055
AGCGAATGCATTCCAATCAGCAAGAAAACGTGACTAAGGCACAACTTCACGCTAGGCGCTCATCC
CTAGCTTGTTCCTCGCTCCCTTGCTTGAAAGAGAAAAGGCAAGCGCTGACCTTCCTTTCCTATCT
GGTCGAGCTAGCTTCTCCTCGGGAACTGACCACAATTCCTTCCTTTTAGGGGCTCGCTTACAACC
ACCTCCCTGACTCACACCTTCAAGCCTACGCTAGCTCTTCCCTTTTACAGCAGCTTCTGCCCTAC
AAAACTTTCCCCGCATCATCTTCAACGGCAAGCGGTCAGTGACTCCTCAAACCATGCTGGAGACG
ACGGGTCAGTAGTCGTTATAGCCCACTCATCGAAGAAGAAGCTACATCACGAGCTAAGGGCGAAT
ACCAGCTAACGGACTTCAAACCCACCAATTGTATGCAAGCCGAATCAAAGGACTGAAAGAACCAA
TGGTCCCCATTAGTAGGCTGGCAGCGCAGCGTATTGCTTTCAAAG
Found at i:210504 original size:15 final size:16
Alignment explanation
Indices: 210477--210507 Score: 55
Period size: 15 Copynumber: 2.0 Consensus size: 16
210467 AATTCACAGT
210477 TAGACCTGTAGACTGG
1 TAGACCTGTAGACTGG
210493 TAGACC-GTAGACTGG
1 TAGACCTGTAGACTGG
210508 GGAAGCGGAA
Statistics
Matches: 15, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
15 9 0.60
16 6 0.40
ACGTcount: A:0.26, C:0.19, G:0.32, T:0.23
Consensus pattern (16 bp):
TAGACCTGTAGACTGG
Left flanking sequence: Indices 209977 -- 210476
GTGAGACTTTTTTTTCCGGGCTGGCTCATTTGAAAAATCTGGGAAGCGACGACGAAGAAGCGATT
GATTATTCCTATAAAGCCGAAGCCAGTAAAAAACCAATTCGCGCATTAGCTTAGTTCCCATCTCA
TAGAAAAATAATGGTGCGGGGTTCCAAACCTCCTATTAAATAAAGGTAGAACAGAAGAGAGGAAT
CAATCACAGTTTGACGTGCCGAGGAAGATGAAAAGAATAGATGTGGTATACCGAAAGGGTAGAGG
AGGCCTGTTGCCGGGACCCCGTCCTCTTGCAGAGGAGGCAAAGCACCGTAATTCAAATTCAGATC
AAGTGTCAGAAGAAATGGTCGACTCTGAATCCGGATTGGTTTGAATCGAGAATGATATTCCATAA
AAACCGAGATGAGCTATGGGAGACAGAAAGGCCAATAGCTAGCCGATTCGGAAGTCTCAGGATTC
AGGAGATGCAGAGTCCTTTGGATGCGAAAGAAGTCAATTCACAGT
Right flanking sequence: Indices 210508 -- 211007
GGAAGCGGAAGCAGTACCGCTCGGAGAAGTAGGGTCGGTGCGTCACTTAGAATCTGCAGGCCCAC
TCGAGTAAGCTAAGGCGATTGTGAAGATTTAGAATGAAGTGTCAATCTCCCTGGAAAGGTGGATT
TCACTCAGCAGGTTTCCTCTCCCTATCGGTATAGGTTGAGTGCGCCAAGCGTGTTCTCATCGTTG
ATGAGGCTGCTGCCACCGGTTTTTAAGCTGGAGAGTTCGGAACGGGCTTTGATGAGAGTTCGAAA
GTGAAGGCCGGAGGGCCTCTGTTTAGAAAGTGGCAAAGCGCCTTGATTGAACTAAAATCCCTCAC
AGGCATACACTACCTGAAGCTAACTACCTGACATGAACACCCCTTTGGTTAGTTCCAGTCCAAAA
GAGGTCATCGAGAGAATGAAAGCTAAGAAGGGCGCAGTCCCGGTGCGAACGGGCAAGCGGGCGAA
TGACCCGTGAGGAAGTACTTCGTCAGCAGCTTTCGCGGCATGCGC
Found at i:224284 original size:21 final size:21
Alignment explanation
Indices: 224260--224301 Score: 84
Period size: 21 Copynumber: 2.0 Consensus size: 21
224250 ATGCTTCGTT
224260 CTCGACCGGGACTTATTCCTA
1 CTCGACCGGGACTTATTCCTA
224281 CTCGACCGGGACTTATTCCTA
1 CTCGACCGGGACTTATTCCTA
224302 TAGATACCGG
Statistics
Matches: 21, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
21 21 1.00
ACGTcount: A:0.19, C:0.33, G:0.19, T:0.29
Consensus pattern (21 bp):
CTCGACCGGGACTTATTCCTA
Left flanking sequence: Indices 223760 -- 224259
TTTCTAACTTACTTCCGCTCCGCTCGCTCCTCTCATCGAGAAAGCAATTACACATCCTGACTAAG
GAGCACAGGCAATAGGTTCGTAGGAAGAGGCAAGCGTTCACACATCCGTCTCTATCATATGTGTT
GGGTGAAGAGCTAAGACTATGCCTGGGCCGGGGTCAGGAAGACAGGCAGAAGGAGTAAGCAGCTT
AAGCAAGAGACCTTATCTTATAGAGTGCAATTTATCTTCTCCAGTAAAGGAAGTAAGTTCGCTAG
CTGTCCAAGGGGCAAAGAGTAGTATTCCGATCTCTCTTGAAAGCAATCAAGCGTGAGAAGCAGGA
TCCGTCCACAGCTTTGAGCCCTTTCCCTTAAGAAGTTCCTCCTTCTCTCCGGATTCTCGTATAAA
GAAGCAATTACCTAAAAGAAGAGGTGACAGGCAGTTGGACTTAGCTTTCCCTAGTTAGGGGCACA
CAAATGAGAGATTGGAGAATAGATTCATTTCACCGATGCTTCGTT
Right flanking sequence: Indices 224302 -- 224801
TAGATACCGGAGATATAGATATAAAGGAAGCTTTGAACTACTTATTTAGAGGGAGAAGGGAAGGA
ACTAGCCCTCTCCATTTGGATAATTTGTTTTAGGATTCAGCCGTGGATGCAGGATGCAGTCATGG
AAAAGAATAATTAGGTTTGATTGATTACCCCAGCCCAGGAAGTTTTAGCACAAGGAAATCGTGGA
GACGCAGCTTTATTGGGAAATGACTGGAGCTTTGGCCTATGTTGGAGTATGTGGAGAAGCGCCTT
CTGTCGTTTTCGTTGAGGAGGCGGAATGCATCTCTTATGTGAAGGAAACACTTTTCAAATGGATG
GAAGCCGCTTTCTATCACGAAAACAAAGAGCAAATCACCCCGCTGTTGACCAGGATCTGTATGTC
CAAGCTTTGCATACGGGAGACTATAATTGAATGAGAAAAGGCAAGAAAGAGTGGCTCGACAGGCG
TTCACCGTCAACAGAATGGAATATGTTCTAGTAGACTTAAACCAA
Found at i:258339 original size:3 final size:3
Alignment explanation
Indices: 258331--258361 Score: 53
Period size: 3 Copynumber: 10.3 Consensus size: 3
258321 TCCGAATTAG
*
258331 CTC CTC CTC CTC CTC CTC CTC CTT CTC CTC C
1 CTC CTC CTC CTC CTC CTC CTC CTC CTC CTC C
258362 AAGATCGTCG
Statistics
Matches: 26, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
3 26 1.00
ACGTcount: A:0.00, C:0.65, G:0.00, T:0.35
Consensus pattern (3 bp):
CTC
Left flanking sequence: Indices 257831 -- 258330
CGCTGGCTTGGCTCTTCGACCAAGGAGGCATTCTGGTAGGAAGGCCAACCACTACATAAGCCGCC
ATCAGTCCAGGAGAGAAGCAAGCTACCTTTCTTTGATCTACCTTCCCGGGCAGGGAAGAGAACGC
AAATAGGCTGCGGATGGTGGCCGTGGTAGGTTCGAGGATCTTCTGCGGCGGAGCGAACTCTTCTA
TCGTGTTGCATTTCCTCTGGCGGCGTAGCTGCACCCCCTCGATCCATCGTACCGGAGCGATCCGA
GAAGAACGATTAGGGTCATATTCTATCCTTTCTACAATGCCCATAGACGAAGTGCTTCGTTTCAG
ATCAATTCTTCGCAGCAATCGCTTTGATCCACCCCCTCGGTGAAAAACCGTAATACGCCCTGAGG
AATTCCTCCCAGCAGACTTCCCTGTACTCAAAGTGAATTGTCTAAGTGCTCTCCCCTGTAGGCTT
TGTCTCATTGTCTCTCTCGTAATCATTCCATCTAGTCCGAATTAG
Right flanking sequence: Indices 258362 -- 258861
AAGATCGTCGTTGGTCCTTCGCAATAAAAAGAAATTCTCTCTTTTCGATACAGTACGTTAAACTG
AAAACCCAATCTCGATTCAAAACAAAGACATTGAAAGCGAACTCACTTTTTCTTGTATCGTCGGA
ACGGTTCTACTATGCCAGCGGTGACCGGGTTACGTTCGTAAACGTGTAAACCACTGTTGGGCGCC
GATCCGTGAGACGAAGAAAAGAATTCGTTCCTCTATTTGTTACGATAATAGGAGTTCAGGTAGGA
GTGAAAAAGTCAGGAAGAGTTTAAGCCGAGTCACCAAGTCATGAAGAACTACTCTGAGAAGAGTG
GTATATAGCTCCTAGGCAAGAACTGGTCTTTAGTAAGGGCTAGACCCAGCGCTGCACTGACTCAC
TGATCGATTAGCAAGAATAGCTTTCCCCAGCACAAGACTTGTTCAAGGAGTTTCGTTTCCATTCT
TAGCTTCAATCCGTAAGGGAAATAGAGACTAGTTCCCATAAGCAG
Done.