Specifications
==============

Sequence source file: "/mnt/biodata02/home/xyzhang/pmgdraw-test/test_set/outdir_mt2/NC_031846.1/NC_031846/Repetitive_sequence/123.misa.ini"

Definement of microsatellites (unit size / minimum number of repeats):
(1/10) (2/6) (3/5) (4/5) (5/5) (6/5) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              1
Total size of examined sequences (bp):           103098
Total number of identified SSRs:                 61
Number of SSR containing sequences:              1
Number of sequences containing more than 1 SSR:  1
Number of SSRs present in compound formation:    7


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	42
2	19

Frequency of identified SSR motifs
----------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	15	16	total
A	-	-	-	-	-	12	3	2	2				19
G	-	-	-	-	-		1						1
T	-	-	-	-	-	13	4	2	2			1	22
AT	-	9	3	2	1		1						16
CT	-	1											1
TA	-			1		1							2

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	15	16	total
A/T	-	-	-	-	-	25	7	4	4			1	41
C/G	-	-	-	-	-		1						1
AG/CT	-	1											1
AT/AT	-	9	3	3	1	1	1						18