Specifications
==============

Sequence source file: "/mnt/biodata02/home/xyzhang/pmgdraw-test/test_set/outdir_mt2/NC_037041.1/NC_037041/Repetitive_sequence/123.misa.ini"

Definement of microsatellites (unit size / minimum number of repeats):
(1/10) (2/6) (3/5) (4/5) (5/5) (6/5) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              1
Total size of examined sequences (bp):           142510
Total number of identified SSRs:                 37
Number of SSR containing sequences:              1
Number of sequences containing more than 1 SSR:  1
Number of SSRs present in compound formation:    5


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	20
2	15
3	2

Frequency of identified SSR motifs
----------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	15	16	17	18	total
A	-	-	-	-	-	4	2								6
C	-	-	-	-	-	2	1			1					4
G	-	-	-	-	-	2		2	1						5
T	-	-	-	-	-	3	1		1						5
AT	-	2	4	2	1		2								11
TA	-	1	1	1										1	4
ATT	1														1
TAT		1													1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	15	16	17	18	total
A/T	-	-	-	-	-	7	3		1						11
C/G	-	-	-	-	-	4	1	2	1	1					9
AT/AT	-	3	5	3	1		2							1	15
AAT/ATT	1	1													2