Specifications
==============

Sequence source file: "/mnt/biodata02/home/xyzhang/pmgdraw-test/test_set/outdir_mt2/NC_048499.1/NC_048499/Repetitive_sequence/123.misa.ini"

Definement of microsatellites (unit size / minimum number of repeats):
(1/10) (2/6) (3/5) (4/5) (5/5) (6/5) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              1
Total size of examined sequences (bp):           301823
Total number of identified SSRs:                 36
Number of SSR containing sequences:              1
Number of sequences containing more than 1 SSR:  1
Number of SSRs present in compound formation:    1


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	31
2	2
3	2
5	1

Frequency of identified SSR motifs
----------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	15	total
A	-	-	-	-	-	6	4	1	1		1	13
G	-	-	-	-	-	2						2
T	-	-	-	-	-	11	4	1				16
AG	-	1										1
TA	-	1										1
ATG							1					1
TAA	1											1
TATTC		1										1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	15	total
A/T	-	-	-	-	-	17	8	2	1		1	29
C/G	-	-	-	-	-	2						2
AG/CT	-	1										1
AT/AT	-	1										1
AAT/ATT	1											1
ATC/ATG							1					1
AATAG/ATTCT		1										1