Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_052879
Parameters: 2 7 7 80 10 50 500
Length:  386758

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6392--6431
8
4.6
8
82
17
53
47
2
0
50
1.14
6397--6439
19
2.3
19
100
0
86
41
4
0
53
1.21
14882--14916
9
3.9
9
88
0
52
17
48
11
22
1.79
39701--39754
22
2.5
22
85
8
67
27
9
48
14
1.75
39718--39762
21
2.1
22
87
4
65
26
15
37
20
1.92
63550--63589
18
2.5
15
78
21
53
40
12
32
15
1.84
63555--63589
18
1.9
18
100
0
70
40
11
31
17
1.85
74499--74536
20
1.9
20
89
10
60
31
34
10
23
1.89
125615--125657
18
2.4
18
81
18
54
34
25
20
18
1.96
135136--135172
17
2.2
17
90
0
56
40
18
10
29
1.85
187464--187497
14
2.5
14
90
4
52
23
38
14
23
1.92
225482--225524
18
2.6
16
82
10
52
25
32
20
20
1.97
252864--252942
39
2.0
39
95
0
140
21
29
18
30
1.97
290668--290693
13
2.0
13
100
0
52
53
0
23
23
1.46
321929--321969
18
2.3
18
87
8
57
26
29
17
26
1.97
323431--323456
13
2.0
13
100
0
52
46
23
15
15
1.83
334989--335030
21
2.0
20
86
4
57
14
42
4
38
1.66
340102--340213
30
3.5
30
74
17
118
20
15
8
56
1.64
340133--340243
42
2.6
42
68
13
102
18
14
9
56
1.65
340145--340200
18
3.1
18
77
10
60
17
16
8
57
1.64
340163--340223
24
2.5
24
83
0
68
21
13
6
59
1.57
340225--340261
18
2.1
18
94
0
65
5
21
16
56
1.59
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
357548--357582
17
2.1
17
100
0
70
45
28
11
14
1.79
386240--386264
13
1.9
13
100
0
50
52
0
0
48
1.00

Tables:   1

The End!