Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_017840
Parameters: 2 7 7 80 10 50 500
Length:  228493

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52052--52085
12
2.8
12
90
4
50
41
0
2
55
1.15
52048--52093
16
2.8
16
81
12
58
45
0
2
52
1.13
57520--57556
19
2.0
19
89
5
58
32
10
27
29
1.90
81171--81216
22
2.1
22
95
0
83
30
17
36
15
1.91
109076--109130
28
2.0
28
92
0
92
36
20
21
21
1.95
121826--121865
14
2.8
15
85
7
57
55
7
25
12
1.63
143789--143828
21
1.9
21
84
0
53
40
10
17
32
1.83
164582--164634
20
2.7
20
78
0
61
22
30
20
26
1.98
191017--191058
2
21.0
2
85
0
57
47
2
4
45
1.36
191505--191542
17
2.2
17
95
0
67
42
10
5
42
1.62
203925--203983
27
2.2
27
81
6
75
13
37
35
13
1.84
211646--211691
20
2.3
20
92
0
74
13
34
26
26
1.92

Tables:   1

The End!