Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_050335
Parameters: 2 7 7 80 10 50 500
Length:  566695

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28936--28966
15
2.1
15
100
0
62
54
0
19
25
1.44
46369--46399
16
2.0
16
93
6
55
51
12
16
19
1.76
92552--92594
21
2.1
20
82
4
50
18
16
20
44
1.87
101254--101300
24
2.0
24
86
0
67
23
27
21
27
1.99
104735--104762
7
4.0
7
100
0
56
28
14
14
42
1.84
107251--107531
155
1.8
156
82
4
370
27
15
21
35
1.94
243127--243176
25
2.0
24
84
3
64
30
10
6
54
1.58
257155--257202
21
2.3
21
89
3
71
22
31
18
27
1.97
276314--276370
27
2.1
27
100
0
114
19
24
35
21
1.96
278460--278493
9
3.8
9
100
0
68
44
11
11
32
1.77
313427--313464
20
1.9
20
94
0
67
34
26
28
10
1.90
318748--318785
19
2.0
19
89
0
58
39
18
13
28
1.88
327681--327710
15
2.0
15
100
0
60
40
13
0
46
1.43
424864--424905
22
1.9
22
85
9
59
40
14
38
7
1.73
433721--433780
18
3.3
18
88
0
93
33
25
10
31
1.89
436151--436224
21
3.4
21
83
12
69
55
12
20
12
1.68
436133--436246
42
2.5
45
81
8
126
54
10
21
13
1.68
436167--436246
24
3.5
24
93
5
130
51
12
22
13
1.75
438549--438582
17
2.0
17
88
0
50
29
20
11
38
1.88
461082--461118
15
2.5
15
100
0
74
40
8
0
51
1.32
464528--464574
18
2.6
18
79
0
58
17
14
36
31
1.90
540815--540856
22
1.9
22
85
9
59
40
14
38
7
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
549672--549731
18
3.3
18
88
0
93
33
25
10
31
1.89
552102--552175
21
3.4
21
83
12
69
55
12
20
12
1.68
552084--552197
42
2.5
45
81
8
126
54
10
21
13
1.68
552118--552197
24
3.5
24
93
5
130
51
12
22
13
1.75
554500--554533
17
2.0
17
88
0
50
29
20
11
38
1.88

Tables:   1

The End!