Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_066407
Parameters: 2 7 7 80 10 50 500
Length:  335372

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5346--5412
21
2.9
24
70
20
70
55
7
25
11
1.62
13812--13850
16
2.4
16
86
4
51
30
15
33
20
1.94
38298--38351
27
2.0
27
100
0
108
29
33
3
33
1.75
59206--59249
20
2.1
21
91
4
72
52
4
34
9
1.54
70491--70539
24
2.0
24
100
0
98
22
4
48
24
1.67
82586--82659
37
2.0
37
100
0
148
37
13
29
18
1.90
93865--93898
18
1.9
17
88
5
50
35
29
20
14
1.93
94819--94884
18
3.5
18
78
10
69
6
19
12
62
1.50
103664--103717
27
2.0
27
100
0
108
29
33
3
33
1.75
133811--133889
39
2.0
39
95
0
140
22
27
17
31
1.97
144595--144646
27
1.9
27
92
0
86
36
7
21
34
1.82
173836--173879
21
2.1
21
100
0
88
13
20
27
38
1.90
224356--224398
18
2.4
18
81
18
54
18
20
25
34
1.96
226010--226053
21
2.1
21
95
0
79
25
22
13
38
1.91
227631--227680
25
2.0
25
100
0
100
36
24
16
24
1.94
256029--256067
20
2.0
20
100
0
78
66
10
12
10
1.44
265544--265742
96
2.1
96
91
0
317
38
12
20
28
1.89
282385--282459
25
3.0
25
96
0
132
17
34
13
34
1.89
282992--283042
25
2.0
25
84
0
66
60
3
25
9
1.45
292908--292950
18
2.4
18
81
18
54
18
20
25
34
1.96
294562--294605
21
2.1
21
95
0
79
25
22
13
38
1.91
296183--296232
25
2.0
25
100
0
100
36
24
16
24
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
324159--324188
12
2.5
12
94
0
51
16
30
10
43
1.81
329409--329448
16
2.6
16
88
4
55
37
27
30
5
1.78

Tables:   1

The End!