Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_059793
Parameters: 2 7 7 80 10 50 500
Length:  320439

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12844--12869
13
2.0
13
100
0
52
53
15
7
23
1.67
42154--42183
12
2.5
12
94
0
51
16
30
10
43
1.81
64951--65000
25
2.0
25
100
0
100
24
16
24
36
1.94
66578--66621
21
2.1
21
95
0
79
38
13
22
25
1.91
68233--68275
18
2.4
18
81
18
54
34
25
20
18
1.96
107070--107109
16
2.6
16
88
4
55
5
30
27
37
1.78
145599--145665
21
2.9
24
70
20
70
55
7
25
11
1.62
152667--152710
21
2.1
21
100
0
88
38
27
20
13
1.90
181877--181928
27
1.9
27
92
0
86
34
21
7
36
1.82
192632--192710
39
2.0
39
95
0
140
31
17
27
22
1.97
205751--205791
20
2.0
20
100
0
82
63
4
17
14
1.47
269813--269856
20
2.1
21
91
4
72
52
4
34
9
1.54
272092--272153
21
3.0
21
100
0
124
38
14
19
27
1.90
277793--277909
30
4.0
30
91
6
204
41
12
35
10
1.77
277793--277914
57
2.1
57
98
0
235
41
13
34
10
1.78
277941--277989
18
2.7
18
96
0
89
65
16
16
2
1.37
278558--278634
38
2.0
38
97
0
145
29
20
23
25
1.99
278570--278679
36
3.0
36
86
5
132
23
19
25
31
1.98
285818--285879
21
3.0
21
100
0
124
27
19
14
38
1.90
287529--287581
27
2.0
27
96
0
97
18
20
11
49
1.78
287654--287690
19
1.9
19
94
0
65
27
16
8
48
1.74
293167--293217
25
2.0
25
84
0
66
60
3
25
9
1.45
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
303080--303122
18
2.4
18
81
18
54
18
20
25
34
1.96
304734--304777
21
2.1
21
95
0
79
25
22
13
38
1.91
306355--306404
25
2.0
25
100
0
100
36
24
16
24
1.94

Tables:   1

The End!