Specifications
==============

Sequence source file: "/home/xyzhang/pmgdraw/PMGview/media/downloads/20230525044117_47/NC_067943/Repetitive_sequence/123.misa.ini"

Definement of microsatellites (unit size / minimum number of repeats):
(1/10) (2/6) (3/5) (4/5) (5/5) (6/5) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              1
Total size of examined sequences (bp):           816410
Total number of identified SSRs:                 42
Number of SSR containing sequences:              1
Number of sequences containing more than 1 SSR:  1
Number of SSRs present in compound formation:    1


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	36
2	4
3	2

Frequency of identified SSR motifs
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Repeats	5	6	7	8	9	10	11	12	13	14	total
A	-	-	-	-	-	9	3	3			15
C	-	-	-	-	-		1				1
G	-	-	-	-	-	1					1
T	-	-	-	-	-	13	4		1	1	19
AG	-	1	1								2
CT	-	1									1
GA	-	1									1
AAG	1										1
CTT	1										1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	total
A/T	-	-	-	-	-	22	7	3	1	1	34
C/G	-	-	-	-	-	1	1				2
AG/CT	-	3	1								4
AAG/CTT	2										2