Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_024293
Parameters: 2 7 7 80 10 50 500
Length:  548608

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48832--48874
21
2.1
21
86
4
61
18
20
18
41
1.90
106452--106486
17
2.1
17
88
0
52
54
0
0
45
0.99
114235--114266
15
2.1
15
100
0
64
18
25
6
50
1.70
119330--119366
15
2.4
16
90
4
58
21
29
13
35
1.92
153462--153573
34
3.3
34
100
0
224
21
34
10
33
1.88
156191--156242
27
1.9
27
84
0
68
7
30
17
44
1.77
184921--184984
32
2.0
32
100
0
128
37
9
18
34
1.83
287672--287712
21
2.0
21
85
9
57
26
21
14
36
1.93
323131--323176
24
1.9
24
86
8
67
26
30
17
26
1.97
323131--323166
18
2.0
18
88
0
54
30
27
16
25
1.97
342936--342965
8
3.8
8
90
0
51
70
0
0
30
0.88
342931--342964
16
2.1
17
94
5
61
67
2
0
29
1.05
352463--352504
14
3.1
14
86
3
50
54
0
0
45
0.99
397573--397624
2
28.5
2
75
24
53
51
0
1
46
1.12
397578--397624
8
5.3
9
85
12
62
53
0
2
44
1.12
397568--397624
17
3.5
16
78
9
53
50
0
1
47
1.11
399030--399059
9
3.4
9
95
4
53
46
6
0
46
1.29
399030--399063
11
3.1
11
88
12
52
44
8
0
47
1.34
438339--438434
45
2.1
44
81
7
104
32
16
21
29
1.96
447087--447124
20
1.9
20
84
10
51
21
10
10
57
1.61

Tables:   1

The End!