Specifications
==============

Sequence source file: "/mnt/biodata02/home/xyzhang/pmgdraw-test/test_set/outdir_mt2/NC_065218.1/NC_065218/Repetitive_sequence/123.misa.ini"

Definement of microsatellites (unit size / minimum number of repeats):
(1/10) (2/6) (3/5) (4/5) (5/5) (6/5) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              1
Total size of examined sequences (bp):           458897
Total number of identified SSRs:                 67
Number of SSR containing sequences:              1
Number of sequences containing more than 1 SSR:  1
Number of SSRs present in compound formation:    2


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	58
2	4
3	5

Frequency of identified SSR motifs
----------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	total
A	-	-	-	-	-	13	8		2		3		1			1	28
C	-	-	-	-	-	1	1										2
G	-	-	-	-	-	3	1										4
T	-	-	-	-	-	14	6	1		1		2					24
AG	-	2															2
AT	-	1															1
GA	-		1														1
ACT	1																1
CTT	1																1
GTT	2																2
TAT			1														1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	total
A/T	-	-	-	-	-	27	14	1	2	1	3	2	1			1	52
C/G	-	-	-	-	-	4	2										6
AG/CT	-	2	1														3
AT/AT	-	1															1
AAC/GTT	2																2
AAG/CTT	1																1
AAT/ATT			1														1
ACT/AGT	1																1