Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_062588
Parameters: 2 7 7 80 10 50 500
Length:  422985

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
931--962
16
1.9
17
93
6
57
37
25
12
25
1.91
58114--58150
18
2.1
18
100
0
74
29
32
21
16
1.95
68527--68597
36
2.0
36
97
0
133
25
15
25
33
1.95
68801--68836
18
2.0
18
100
0
72
33
16
11
38
1.84
69245--69279
18
1.9
18
100
0
70
22
14
28
34
1.93
69990--70029
20
2.0
20
95
0
71
15
17
17
50
1.79
125117--125159
18
2.4
18
81
18
54
34
25
20
18
1.96
129760--129821
32
1.9
32
93
0
106
19
24
20
35
1.96
135342--135379
19
2.0
19
100
0
76
36
21
26
15
1.93
168195--168273
39
2.0
39
95
0
140
32
18
26
21
1.97
207532--207558
12
2.2
12
100
0
54
85
0
7
7
0.75
207528--207561
17
2.0
17
88
11
52
82
0
8
8
0.85
217381--217410
14
2.1
14
100
0
60
73
0
6
20
1.05
257628--257665
18
2.1
18
100
0
76
34
15
28
21
1.94
278399--278436
20
1.9
20
100
0
76
5
26
0
68
1.11
278403--278444
18
2.2
19
83
8
50
9
26
0
64
1.24
278400--278442
20
2.1
20
86
4
59
9
25
0
65
1.22
333682--333721
20
2.0
21
85
5
55
2
22
27
47
1.64
378539--378620
29
2.8
29
68
14
69
35
15
36
12
1.85
380477--380546
16
4.4
16
94
3
115
44
11
0
44
1.40
380486--380549
21
3.1
22
78
10
64
43
9
0
46
1.35
380479--380547
2
33.5
2
73
21
54
43
10
0
46
1.37

Tables:   1

The End!