Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_041085
Parameters: 2 7 7 80 10 50 500
Length:  838420

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30806--30852
18
2.6
18
93
0
76
31
17
36
14
1.90
64406--64442
18
2.1
17
90
5
56
0
27
21
51
1.48
73331--73356
13
2.0
13
100
0
52
15
23
15
46
1.83
115901--115943
22
2.0
22
85
0
59
51
9
23
16
1.73
161481--161516
16
2.2
16
100
0
72
38
11
11
38
1.76
277419--277461
18
2.4
18
81
18
54
18
20
25
34
1.96
296535--296602
33
2.1
33
91
0
109
50
20
20
8
1.75
376901--376948
24
2.0
24
87
0
69
27
22
29
20
1.99
398418--398468
22
2.3
22
89
0
84
15
17
37
29
1.91
400366--400418
26
2.0
26
100
0
106
43
7
22
26
1.80
403939--403990
21
2.5
21
87
0
68
44
25
11
19
1.84
459117--459161
17
2.6
17
78
0
54
33
6
20
40
1.78
504343--504382
21
1.9
21
89
0
62
30
22
40
7
1.81
594510--594549
20
2.0
20
100
0
80
20
15
10
55
1.68
628550--628629
35
2.3
35
100
0
160
22
37
21
18
1.94
668321--668359
20
2.0
20
85
10
53
53
7
25
12
1.65
739824--739862
19
2.1
19
85
9
53
71
12
15
0
1.14
786885--786918
15
2.3
15
95
5
61
35
0
0
64
0.94
788792--788822
15
2.1
15
93
0
53
45
9
3
41
1.53
788814--788845
15
2.1
15
94
0
55
40
3
12
43
1.58

Tables:   1

The End!