Specifications
==============

Sequence source file: "/mnt/biodata02/home/xyzhang/pmgdraw-test/test_set/outdir_mt2/NC_016742.1/NC_016742/Repetitive_sequence/123.misa.ini"

Definement of microsatellites (unit size / minimum number of repeats):
(1/10) (2/6) (3/5) (4/5) (5/5) (6/5) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              1
Total size of examined sequences (bp):           425718
Total number of identified SSRs:                 46
Number of SSR containing sequences:              1
Number of sequences containing more than 1 SSR:  1
Number of SSRs present in compound formation:    1


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	37
2	5
3	2
4	1
5	1

Frequency of identified SSR motifs
----------------------------------

Repeats	5	6	7	8	9	10	11	12	13	total
A	-	-	-	-	-	9	6	3	4	22
T	-	-	-	-	-	10	1	3	1	15
AG	-	1								1
CT	-	1								1
GA	-	1								1
TA	-	2								2
AAG	1									1
TTA	1									1
TTTG	1									1
TATTA	1									1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	5	6	7	8	9	10	11	12	13	total
A/T	-	-	-	-	-	19	7	6	5	37
AG/CT	-	3								3
AT/AT	-	2								2
AAG/CTT	1									1
AAT/ATT	1									1
AAAC/GTTT	1									1
AATAT/ATATT	1									1