Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_013444
Parameters: 2 7 7 80 10 50 500
Length:  168526

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13609--13699
27
3.3
27
68
6
74
34
10
13
41
1.79
19547--19584
10
3.7
10
93
6
67
0
7
76
15
1.01
19545--19585
11
3.8
11
93
6
75
0
7
75
17
1.02
19545--19584
21
1.9
21
100
0
80
0
7
75
17
1.03
25335--25372
19
2.0
19
100
0
76
15
21
21
42
1.89
28720--28787
33
2.1
33
94
0
118
39
7
27
25
1.82
30328--30356
15
1.9
15
100
0
58
27
13
44
13
1.82
31831--31870
21
1.9
21
100
0
80
47
5
25
22
1.71
31831--31878
21
2.3
21
92
0
78
47
4
27
20
1.68
34744--34781
12
2.9
13
88
7
51
57
2
0
39
1.12
36921--36975
27
2.0
27
92
0
92
21
12
9
56
1.64
37626--37681
28
2.0
28
100
0
112
35
10
3
50
1.55
39708--39745
19
2.0
19
100
0
76
26
31
15
26
1.96
47566--47621
28
2.0
28
100
0
112
39
17
25
17
1.92
53844--53955
53
2.1
53
86
3
154
28
21
35
14
1.92
62144--62199
27
2.1
27
86
0
76
46
14
12
26
1.80
89393--89424
15
2.1
15
100
0
64
34
18
18
28
1.95
90936--90963
2
14.0
2
100
0
56
50
0
0
50
1.00
99762--99796
18
1.9
18
100
0
70
25
34
17
22
1.96
99952--99994
18
2.4
18
80
0
50
6
55
20
16
1.64
100446--100476
9
3.4
9
100
0
62
9
48
12
29
1.73
100831--100871
21
2.0
21
90
0
64
19
36
24
19
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
102238--102265
2
14.0
2
100
0
56
50
0
0
50
1.00
112746--112788
21
2.0
21
95
0
77
23
9
25
41
1.84
112832--112975
72
2.0
72
100
0
288
27
22
20
29
1.99
114415--114457
22
2.0
22
82
13
54
60
25
4
9
1.47
132970--133049
24
3.3
24
96
3
144
30
10
7
52
1.62
134213--134239
14
1.9
14
100
0
54
51
14
11
22
1.73
134512--134553
19
2.2
19
95
0
75
11
14
9
64
1.50
134692--134744
23
2.3
23
81
12
65
15
13
7
64
1.49
134716--134789
16
4.4
16
88
8
103
13
13
6
66
1.44
144879--144925
20
2.3
20
81
3
58
29
23
4
42
1.73
146141--146205
32
2.0
32
100
0
130
15
24
21
38
1.92
150254--150298
23
1.9
24
90
4
74
8
17
6
66
1.40

Tables:   1

The End!