Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_035958
Parameters: 2 7 7 80 10 50 500
Length:  1249593

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8912--8952
18
2.3
18
100
0
82
39
29
4
26
1.77
136290--136325
18
2.0
18
94
0
63
33
16
13
36
1.89
144290--144314
12
2.1
12
100
0
50
32
28
8
32
1.86
238733--238763
15
2.1
15
93
0
53
9
35
12
41
1.76
299800--299874
24
3.1
24
71
9
71
46
13
16
24
1.82
352897--352942
23
2.0
23
91
8
76
13
32
19
34
1.90
454178--454223
20
2.3
20
79
20
53
36
15
23
23
1.93
534282--534321
21
1.9
21
84
0
53
40
12
17
30
1.86
544270--544295
13
2.0
13
100
0
52
53
0
15
30
1.42
564556--564605
25
2.0
25
88
0
73
44
20
20
16
1.87
564558--564611
25
2.2
25
82
0
63
44
18
22
14
1.86
581801--581827
13
2.1
13
100
0
54
33
22
7
37
1.82
618553--618593
18
2.3
18
100
0
82
39
29
4
26
1.77
636631--636659
14
2.1
14
100
0
58
34
6
0
58
1.25
645888--645915
14
2.0
14
100
0
56
42
21
7
28
1.79
687274--687298
12
2.1
12
100
0
50
24
8
16
52
1.70
763642--763680
18
2.2
18
86
4
53
15
33
25
25
1.95
878356--878406
21
2.4
21
93
0
84
37
13
11
37
1.82
910965--910990
13
2.0
13
100
0
52
23
30
15
30
1.95
932098--932131
17
2.0
17
94
0
59
38
11
23
26
1.89
962293--962329
18
2.1
18
94
0
65
37
27
16
18
1.92
1019361--1019390
15
2.0
15
93
0
51
33
16
13
36
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1046236--1046302
29
2.3
29
100
0
134
14
35
20
28
1.93
1067143--1067177
17
2.0
18
88
5
54
25
22
17
34
1.96
1074865--1074890
13
2.0
13
100
0
52
61
0
23
15
1.33
1120590--1120615
13
2.0
13
100
0
52
23
30
7
38
1.83
1141484--1141509
13
2.0
13
100
0
52
53
7
15
23
1.67

Tables:   1

The End!