Specifications
==============

Sequence source file: "/mnt/biodata02/home/xyzhang/pmgdraw-test/test_set/outdir_mt10/NC_059792.1/NC_059792/Repetitive_sequence/123.misa.ini"

Definement of microsatellites (unit size / minimum number of repeats):
(1/10) (2/6) (3/5) (4/5) (5/5) (6/5) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              1
Total size of examined sequences (bp):           379922
Total number of identified SSRs:                 31
Number of SSR containing sequences:              1
Number of sequences containing more than 1 SSR:  1
Number of SSRs present in compound formation:    1


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	24
2	4
3	1
5	2

Frequency of identified SSR motifs
----------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	15	16	17	total
A	-	-	-	-	-	11	3		1				1	16
G	-	-	-	-	-	2								2
T	-	-	-	-	-	3	1	1		1				6
AG	-	1												1
AT	-	3												3
TAA	1													1
CTCTT		1												1
TTCCT	1													1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	15	16	17	total
A/T	-	-	-	-	-	14	4	1	1	1			1	22
C/G	-	-	-	-	-	2								2
AG/CT	-	1												1
AT/AT	-	3												3
AAT/ATT	1													1
AAAGG/CCTTT	1													1
AAGAG/CTCTT		1												1