Specifications
==============

Sequence source file: "/mnt/biodata02/home/xyzhang/pmgdraw-test/test_set/outdir_mt3/NC_065024.1/NC_065024/Repetitive_sequence/123.misa.ini"

Definement of microsatellites (unit size / minimum number of repeats):
(1/10) (2/6) (3/5) (4/5) (5/5) (6/5) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              1
Total size of examined sequences (bp):           416511
Total number of identified SSRs:                 37
Number of SSR containing sequences:              1
Number of sequences containing more than 1 SSR:  1
Number of SSRs present in compound formation:    1


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	31
2	4
3	2

Frequency of identified SSR motifs
----------------------------------

Repeats	5	6	7	8	9	10	11	12	total
A	-	-	-	-	-	9	4	1	14
C	-	-	-	-	-	1	1	1	3
G	-	-	-	-	-	1			1
T	-	-	-	-	-	7	5	1	13
AT	-	2							2
TC	-	1	1						2
TTA	1								1
TTC	1								1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	5	6	7	8	9	10	11	12	total
A/T	-	-	-	-	-	16	9	2	27
C/G	-	-	-	-	-	2	1	1	4
AG/CT	-	1	1						2
AT/AT	-	2							2
AAG/CTT	1								1
AAT/ATT	1								1