Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: BK059358
Parameters: 2 7 7 80 10 50 500
Length:  482735

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33114--33151
19
2.0
19
100
0
76
26
26
10
36
1.89
41448--41504
3
18.7
3
76
16
55
38
0
1
59
1.08
41448--41505
18
3.1
18
79
13
71
39
0
1
58
1.08
92549--92758
105
2.0
105
100
0
420
15
35
15
34
1.89
101528--101738
105
2.0
105
100
0
422
28
26
23
21
1.99
131793--131863
16
4.4
17
84
12
105
66
0
0
33
0.92
131793--131863
32
2.2
33
92
5
119
66
0
0
33
0.92
131794--131872
21
3.6
21
84
10
88
64
0
0
35
0.94
131886--131928
10
4.3
10
100
0
86
51
0
9
39
1.34
164186--164260
26
2.8
26
91
6
114
37
25
12
25
1.90
215703--215741
19
2.0
20
85
14
55
48
10
30
10
1.70
253626--253667
21
2.0
21
95
0
75
28
28
11
30
1.92
253973--254016
22
2.0
22
100
0
88
22
22
22
31
1.98
284640--284691
18
2.8
18
85
2
68
53
0
0
46
1.00
284640--284690
22
2.5
20
87
9
68
54
0
0
45
0.99
284656--284701
22
2.1
22
84
8
58
56
0
4
39
1.19
298731--298791
3
19.7
3
87
12
88
67
0
0
32
0.91
315774--315816
12
3.6
12
100
0
86
48
9
6
34
1.62
324593--324803
105
2.0
105
100
0
422
34
22
13
29
1.92
391604--391638
16
2.2
16
94
0
61
22
37
20
20
1.95
403073--403283
105
2.0
105
100
0
422
24
20
23
30
1.99
418195--418224
15
2.0
15
93
0
51
33
10
33
23
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
467160--467199
21
1.9
21
89
0
62
45
15
27
12
1.82
467845--467906
31
2.0
31
93
0
106
16
24
14
45
1.84
476242--476451
105
2.0
105
100
0
420
25
14
37
22
1.92
481818--481842
12
2.1
12
100
0
50
84
0
0
16
0.63

Tables:   1

The End!