Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_016740
Parameters: 2 7 7 80 10 50 500
Length:  715001

Tables:   1   

This is table  1  of  1  ( 49 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
670--715
20
2.3
20
96
3
85
39
15
13
32
1.85
37686--37723
19
2.0
19
100
0
76
26
26
10
36
1.89
55702--55734
16
2.1
16
94
0
57
63
0
3
33
1.10
55702--55761
18
3.2
18
84
9
75
61
0
1
36
1.06
55706--55761
16
3.4
16
85
5
58
62
0
1
35
1.06
55737--55797
16
4.1
15
78
14
56
47
0
0
52
1.00
55763--55800
13
3.0
13
80
3
51
47
0
0
52
1.00
109453--109477
12
2.1
12
100
0
50
16
36
8
40
1.77
119556--119629
30
2.5
30
97
0
139
13
31
17
37
1.89
120743--120775
16
2.1
16
100
0
66
42
18
24
15
1.88
123494--123536
15
2.9
15
100
0
86
6
39
6
46
1.58
197516--197579
10
6.3
10
92
3
101
51
0
7
40
1.31
197457--197528
19
3.9
19
70
17
53
52
1
2
43
1.24
229827--229901
26
2.8
26
87
6
105
37
24
13
25
1.91
268539--268569
16
1.9
16
100
0
62
32
3
0
64
1.09
281234--281272
19
2.0
20
85
14
55
48
10
30
10
1.70
327562--327603
21
2.0
21
95
0
75
28
28
11
30
1.92
327909--327952
22
2.0
22
100
0
88
22
22
22
31
1.98
339044--339076
16
1.9
18
88
11
52
51
9
24
15
1.72
349131--349163
14
2.4
14
94
0
57
42
3
12
42
1.57
360465--360499
5
7.0
5
86
0
52
40
0
34
25
1.56
360465--360499
15
2.3
15
100
0
70
40
0
34
25
1.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
403545--403580
3
12.0
3
87
0
54
33
0
0
66
0.92
403573--403619
18
2.7
18
78
15
53
57
2
0
40
1.11
440993--441041
12
4.1
12
97
0
89
44
16
0
38
1.48
453367--453396
12
2.5
12
88
0
51
30
0
0
70
0.88
453366--453406
10
3.8
11
78
15
50
34
0
0
65
0.93
453565--453607
21
2.0
21
95
0
77
37
16
9
37
1.81
454510--454536
12
2.2
12
100
0
54
33
7
22
37
1.82
455852--455946
7
14.1
7
68
19
60
65
0
0
34
0.93
455852--455946
27
3.5
27
100
0
190
65
0
0
34
0.93
457980--458005
13
2.0
13
100
0
52
38
7
0
53
1.30
463328--463376
24
2.0
24
96
0
89
28
30
12
28
1.93
467348--467422
9
9.0
9
66
16
54
33
25
8
33
1.85
467344--467434
15
5.6
17
74
16
86
36
24
6
32
1.81
467351--467427
24
3.2
24
100
0
154
33
24
7
33
1.84
479897--479922
12
2.2
12
100
0
52
42
0
0
57
0.98
533483--533527
15
2.9
16
78
18
51
11
33
8
46
1.70
542819--542865
23
2.0
23
100
0
94
38
29
0
31
1.58
548779--548810
16
2.0
16
100
0
64
31
25
6
37
1.81
616303--616337
16
2.2
16
94
0
61
22
37
20
20
1.95
633803--633840
17
2.2
17
100
0
76
60
0
10
28
1.30
643083--643164
19
4.3
20
73
17
68
46
1
1
51
1.16
643096--643163
27
2.5
28
90
4
104
47
0
0
52
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
643116--643163
8
5.5
8
77
18
51
43
0
0
56
0.99
655234--655263
15
2.0
15
93
0
51
33
10
33
23
1.88
692251--692290
21
1.9
21
89
0
62
45
15
27
12
1.82
692936--692997
31
2.0
31
93
0
106
16
24
14
45
1.84
713330--713354
12
2.1
12
100
0
50
32
8
0
60
1.26

Tables:   1

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