Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_066488
Parameters: 2 7 7 80 10 50 500
Length:  457380

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8560--8604
23
2.0
23
91
4
74
15
40
8
35
1.79
8624--8663
20
2.0
20
100
0
80
25
25
5
45
1.73
64202--64249
19
2.5
19
89
0
78
45
12
16
25
1.82
99661--99686
13
2.0
13
100
0
52
46
7
0
46
1.31
113821--113857
16
2.5
15
87
12
58
16
18
24
40
1.90
113821--113857
15
2.4
16
91
8
60
16
18
24
40
1.90
115013--115076
35
1.9
32
84
12
85
20
25
21
32
1.97
116373--116441
27
2.6
27
95
0
120
37
15
15
30
1.90
120289--120328
21
1.9
21
94
0
71
20
17
5
57
1.58
120377--120440
33
1.9
33
96
0
119
17
35
23
23
1.95
120392--120503
54
2.1
54
96
0
206
16
36
20
26
1.93
120501--120554
27
2.0
27
100
0
108
37
18
33
11
1.86
121182--121256
29
2.6
29
100
0
150
37
10
18
33
1.86
121373--121430
28
2.1
28
93
6
100
43
13
24
18
1.87
121446--121478
17
1.9
17
93
0
57
51
3
9
36
1.49
124791--124858
32
2.1
33
97
2
129
47
11
22
19
1.81
182912--182939
14
2.0
14
100
0
56
28
21
7
42
1.79
184809--184855
16
3.0
16
84
9
53
34
19
8
38
1.82
194726--194773
23
2.1
23
92
0
78
31
29
0
39
1.57
204209--204273
32
2.2
31
86
10
91
35
13
18
32
1.90
269815--269862
25
1.9
25
95
0
87
52
0
14
33
1.42
269816--269857
13
3.3
13
73
6
50
47
0
16
35
1.47
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
285436--285475
19
2.1
19
90
0
62
22
20
17
40
1.92
286736--286768
16
2.1
16
94
0
57
24
12
27
36
1.91
303376--303412
16
2.5
15
87
12
58
16
18
24
40
1.90
303376--303412
15
2.4
16
91
8
60
16
18
24
40
1.90
304568--304631
35
1.9
32
84
12
85
20
25
21
32
1.97
305928--305996
27
2.6
27
95
0
120
37
15
15
30
1.90
319767--319814
19
2.5
19
89
0
78
45
12
16
25
1.82
355226--355251
13
2.0
13
100
0
52
46
7
0
46
1.31
394483--394551
36
1.9
36
100
0
138
36
18
24
20
1.95
428300--428332
16
2.1
16
94
0
57
36
27
12
24
1.91
445206--445253
25
1.9
25
95
0
87
33
14
0
52
1.42
453729--453756
11
2.5
11
100
0
56
71
0
21
7
1.09

Tables:   1

The End!