Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_013816
Parameters: 2 7 7 80 10 50 500
Length:  559045

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
173--220
19
2.5
19
89
0
78
45
12
16
25
1.82
28488--28515
11
2.5
11
100
0
56
71
0
21
7
1.09
40699--40743
23
2.0
23
91
4
74
15
40
8
35
1.79
40763--40802
20
2.0
20
100
0
80
25
25
5
45
1.73
68398--68466
36
1.9
36
100
0
138
20
24
18
36
1.95
120705--120752
25
1.9
25
95
0
87
33
14
0
52
1.42
129844--129883
19
2.1
19
90
0
62
22
20
17
40
1.92
131144--131176
16
2.1
16
94
0
57
24
12
27
36
1.91
188935--188982
19
2.5
19
89
0
78
45
12
16
25
1.82
217249--217276
11
2.5
11
100
0
56
71
0
21
7
1.09
229460--229504
23
2.0
23
91
4
74
15
40
8
35
1.79
229524--229563
20
2.0
20
100
0
80
25
25
5
45
1.73
257157--257225
36
1.9
36
100
0
138
20
24
18
36
1.95
296136--296161
13
2.0
13
100
0
52
46
0
7
46
1.31
329620--329647
14
2.0
14
100
0
56
28
21
7
42
1.79
331517--331563
16
3.0
16
84
9
53
34
19
8
38
1.82
341433--341480
23
2.1
23
92
0
78
31
29
0
39
1.57
364659--364684
13
2.0
13
100
0
52
46
0
7
46
1.31
398142--398169
14
2.0
14
100
0
56
28
21
7
42
1.79
400039--400085
16
3.0
16
84
9
53
34
19
8
38
1.82
409955--410002
23
2.1
23
92
0
78
31
29
0
39
1.57
455526--455590
32
2.2
31
86
10
91
35
13
18
32
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
501426--501458
16
2.1
16
94
0
57
24
12
27
36
1.91

Tables:   1

The End!