Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_029816
Parameters: 2 7 7 80 10 50 500
Length:  515022

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
169--216
19
2.5
19
89
0
78
45
12
16
25
1.82
27345--27372
11
2.5
11
100
0
56
71
0
21
7
1.09
39540--39584
23
2.0
23
91
4
74
15
40
8
35
1.79
99616--99653
17
2.2
17
95
0
67
63
28
0
7
1.23
115088--115120
16
2.1
16
94
0
57
24
12
27
36
1.91
137893--137929
18
2.1
18
100
0
74
48
5
10
35
1.61
169070--169117
19
2.5
19
89
0
78
45
12
16
25
1.82
187893--187937
23
1.9
24
90
4
74
33
31
15
20
1.93
187891--187942
23
2.3
22
80
9
68
28
36
13
21
1.91
196295--196322
11
2.5
11
100
0
56
71
0
21
7
1.09
208490--208534
23
2.0
23
91
4
74
15
40
8
35
1.79
256219--256251
15
2.2
15
100
0
66
33
12
9
45
1.73
271765--271790
13
2.0
13
100
0
52
61
0
7
30
1.24
302563--302704
70
2.0
70
100
0
284
57
7
16
18
1.61
312455--312504
25
2.0
25
100
0
100
12
36
20
32
1.89
334733--334782
25
2.0
25
100
0
100
44
4
16
36
1.66
387201--387233
15
2.2
15
100
0
66
45
9
12
33
1.73
412175--412207
15
2.2
15
100
0
66
54
0
0
45
0.99
415961--416025
32
2.2
31
86
10
91
35
13
18
32
1.90
458189--458229
21
2.0
21
90
0
64
29
24
14
31
1.95
484076--484112
18
2.1
18
100
0
74
48
5
10
35
1.61
496080--496179
52
1.9
52
95
0
182
31
32
22
15
1.94

Tables:   1

The End!