Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_059804
Parameters: 2 7 7 80 10 50 500
Length:  248619

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30807--30840
6
5.7
6
100
0
68
14
17
50
17
1.79
47571--47667
6
16.2
6
100
0
194
16
16
17
49
1.80
52599--52628
5
6.0
5
100
0
60
40
0
0
60
0.97
52980--53034
5
11.0
5
100
0
110
60
0
20
20
1.37
54876--54918
18
2.4
18
81
18
54
18
20
25
34
1.96
61759--61793
5
7.0
5
100
0
70
40
0
0
60
0.97
66535--66564
16
1.9
15
93
6
51
53
6
13
26
1.64
67137--67162
13
2.0
13
100
0
52
30
30
7
30
1.85
95655--95702
9
5.3
9
82
0
51
33
27
6
33
1.82
104342--104369
14
2.0
14
100
0
56
42
0
14
42
1.45
105620--105647
14
2.0
14
100
0
56
28
7
0
64
1.20
108113--108154
6
7.0
6
100
0
84
16
33
16
33
1.92
114297--114321
5
5.0
5
100
0
50
40
0
0
60
0.97
122034--122067
16
2.1
17
94
5
61
44
23
26
5
1.76
124873--124917
5
9.0
5
100
0
90
60
0
0
40
0.97
143383--143412
5
6.0
5
100
0
60
40
0
0
60
0.97
158271--158360
5
18.0
5
100
0
180
20
20
0
60
1.37
159394--159423
5
6.0
5
92
0
51
63
16
0
20
1.31
171368--171407
21
2.0
20
85
5
53
20
12
2
65
1.38
171417--171526
42
2.6
42
89
0
175
20
19
15
45
1.85
172825--172859
17
2.1
17
100
0
70
45
5
28
20
1.73
196857--196886
5
6.0
5
100
0
60
40
0
0
60
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
202929--202967
4
10.2
4
83
10
55
51
0
0
48
1.00
202931--202970
12
3.2
12
92
7
62
57
0
0
42
0.98
219285--219319
5
7.0
5
100
0
70
40
0
0
60
0.97
219352--219397
6
7.7
6
100
0
92
52
15
0
32
1.43
225585--225619
17
2.1
17
88
0
52
65
8
25
0
1.21
227089--227143
6
9.2
6
100
0
110
16
32
18
32
1.93
229692--229721
5
6.0
5
100
0
60
40
0
0
60
0.97
231216--231267
6
8.7
6
100
0
104
32
0
15
51
1.43
232106--232139
6
5.7
6
100
0
68
32
0
14
52
1.42
232172--232196
5
5.0
5
100
0
50
60
0
0
40
0.97

Tables:   1

The End!