Specifications
==============

Sequence source file: "/mnt/biodata02/home/xyzhang/pmgdraw-test/test_set/outdir_mt1/NC_026890.1/NC_026890/Repetitive_sequence/123.misa.ini"

Definement of microsatellites (unit size / minimum number of repeats):
(1/10) (2/6) (3/5) (4/5) (5/5) (6/5) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              1
Total size of examined sequences (bp):           106746
Total number of identified SSRs:                 79
Number of SSR containing sequences:              1
Number of sequences containing more than 1 SSR:  1
Number of SSRs present in compound formation:    9


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	55
2	23
3	1

Frequency of identified SSR motifs
----------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	15	total
A	-	-	-	-	-	15	4	2				21
C	-	-	-	-	-		1					1
G	-	-	-	-	-	2			1			3
T	-	-	-	-	-	22	2	4	1		1	30
AT	-	10	4	4	1		1					20
TA	-	1	1					1				3
ACT	1											1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	15	total
A/T	-	-	-	-	-	37	6	6	1		1	51
C/G	-	-	-	-	-	2	1		1			4
AT/AT	-	11	5	4	1		1	1				23
ACT/AGT	1											1