Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_039531
Parameters: 2 7 7 80 10 50 500
Length:  520764

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
94852--94889
18
2.1
18
95
0
67
60
7
5
26
1.46
105360--105389
15
2.0
15
93
0
51
23
10
40
26
1.86
112414--112447
5
6.6
5
86
6
50
41
0
2
55
1.15
112418--112447
16
1.9
15
93
6
51
43
0
3
53
1.17
116325--116349
6
4.2
6
100
0
50
36
16
16
32
1.90
128159--128198
12
3.3
12
89
0
53
35
12
35
17
1.88
137190--137217
10
2.8
10
100
0
56
32
7
0
60
1.24
168867--168909
18
2.4
18
81
18
54
34
25
20
18
1.96
213145--213190
24
1.9
24
81
0
56
45
19
30
4
1.70
233169--233208
12
3.2
12
79
6
53
30
20
15
35
1.93
277360--277392
5
6.6
5
92
0
57
39
0
3
57
1.14
291570--291618
24
2.0
24
84
0
62
16
14
40
28
1.87
292245--292297
26
2.0
26
85
7
72
30
20
30
18
1.97
319249--319283
16
2.2
16
89
0
52
42
2
2
51
1.31
366679--366719
15
2.7
15
84
0
64
31
29
19
19
1.96
390424--390467
21
2.0
21
82
13
52
31
29
6
31
1.84
393951--394004
24
2.2
24
80
0
72
27
16
29
25
1.97
468400--468437
19
2.0
19
100
0
76
36
15
15
31
1.90
504883--504926
20
2.2
20
91
0
70
36
11
11
40
1.77
509737--509812
39
1.9
39
94
0
134
22
25
21
31
1.98

Tables:   1

The End!