Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_056991
Parameters: 2 7 7 80 10 50 500
Length:  267334

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6166--6199
11
3.1
11
100
0
68
8
35
8
47
1.66
83055--83123
30
2.3
30
94
0
120
39
24
15
20
1.92
87234--87258
12
2.1
12
100
0
50
48
8
0
44
1.32
119216--119410
81
2.4
81
97
0
354
20
33
17
28
1.95
125861--126033
65
2.7
65
100
0
346
36
16
34
12
1.86
126043--126077
15
2.2
16
90
5
54
51
5
14
28
1.65
159300--159342
18
2.4
18
81
18
54
34
25
20
18
1.96
160791--160867
23
3.1
23
69
28
68
35
16
29
18
1.93
162114--162179
28
2.4
28
97
0
123
39
12
36
12
1.80
172459--172535
23
3.1
23
69
28
68
18
29
16
35
1.93
180215--180362
28
5.5
28
85
11
227
34
16
28
20
1.95
180194--180377
51
3.5
51
87
10
280
34
17
28
19
1.95
180299--180377
23
3.2
23
71
22
79
37
16
27
17
1.91
180474--180506
15
2.1
16
94
5
59
54
6
12
27
1.60
199880--199922
18
2.4
18
81
18
54
34
25
20
18
1.96
201371--201447
23
3.1
23
69
28
68
35
16
29
18
1.93
201750--201825
39
1.9
39
94
0
134
31
21
25
22
1.98
249592--249739
28
5.5
28
85
11
227
34
16
28
20
1.95
249676--249754
23
3.2
23
71
22
79
37
16
27
17
1.91
249571--249754
51
3.5
51
87
10
280
34
17
28
19
1.95
264356--264435
23
3.3
23
71
27
74
17
30
16
36
1.92

Tables:   1

The End!