Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: MT784750
Parameters: 2 7 7 80 10 50 500
Length:  159012

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4672--4706
15
2.2
16
95
5
63
34
0
2
62
1.10
4747--4785
20
2.0
20
100
0
78
61
0
17
20
1.34
8350--8380
16
1.9
16
93
0
53
48
9
12
29
1.73
8416--8445
15
2.0
15
100
0
60
60
0
13
26
1.34
28792--28833
20
2.1
20
100
0
84
33
21
4
40
1.74
29635--29677
16
2.7
16
89
7
52
51
0
2
46
1.13
29635--29668
16
2.1
16
100
0
68
50
0
0
50
1.00
33851--33905
17
3.2
17
89
0
92
43
5
7
43
1.55
38013--38055
16
2.6
16
88
7
59
60
6
4
27
1.43
38220--38251
16
2.0
16
100
0
64
18
0
18
62
1.33
38665--38690
13
2.0
13
100
0
52
46
23
15
15
1.83
44346--44379
17
2.0
17
100
0
68
29
17
0
52
1.45
45381--45405
13
1.9
13
100
0
50
0
24
0
76
0.80
48752--48780
14
2.1
14
100
0
58
48
0
6
44
1.29
50596--50629
17
2.0
17
100
0
68
47
17
5
29
1.71
58408--58442
18
1.9
18
88
0
52
40
8
8
42
1.66
61028--61076
25
2.0
24
88
4
71
46
6
4
42
1.47
61482--61516
17
2.1
17
100
0
70
31
11
28
28
1.92
67002--67037
18
2.0
18
88
0
54
52
13
8
25
1.68
70161--70199
21
1.9
21
89
5
62
33
25
10
30
1.89
72728--72766
18
2.2
18
100
0
78
15
33
5
46
1.68
72728--72775
18
2.7
18
90
6
62
18
33
6
41
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74430--74472
10
4.2
10
94
5
77
39
11
0
48
1.40
74429--74470
21
2.0
21
100
0
84
38
14
0
47
1.44
83202--83237
18
2.0
18
100
0
72
22
0
5
72
1.05
83252--83292
19
2.2
19
100
0
82
65
4
19
9
1.40
91143--91217
21
3.2
24
72
12
75
10
22
9
57
1.61
93598--93690
18
5.2
18
98
0
177
29
9
27
33
1.89
101626--101650
12
2.1
12
100
0
50
40
8
8
44
1.63
101943--101980
18
2.1
18
100
0
76
21
10
5
63
1.46
112765--112797
16
2.1
16
100
0
66
69
0
18
12
1.18
115886--115913
13
2.2
13
100
0
56
39
7
0
53
1.28
124348--124373
13
2.0
13
100
0
52
38
15
0
46
1.46
126647--126671
12
2.1
12
100
0
50
60
0
16
24
1.36
128491--128516
12
2.2
12
100
0
52
23
7
0
69
1.14
142156--142193
18
2.1
18
100
0
76
63
5
10
21
1.46
142486--142510
12
2.1
12
100
0
50
44
8
8
40
1.63
150446--150538
18
5.2
18
98
0
177
33
27
9
29
1.89
152919--152993
21
3.2
24
72
12
75
57
9
22
10
1.61

Tables:   1

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