Specifications
==============

Sequence source file: "/mnt/biodata02/home/xyzhang/pmgdraw-test/test_set/outdir_mt2/NC_018554.1/NC_018554/Repetitive_sequence/123.misa.ini"

Definement of microsatellites (unit size / minimum number of repeats):
(1/10) (2/6) (3/5) (4/5) (5/5) (6/5) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              1
Total size of examined sequences (bp):           396947
Total number of identified SSRs:                 46
Number of SSR containing sequences:              1
Number of sequences containing more than 1 SSR:  1
Number of SSRs present in compound formation:    1


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	37
2	6
3	3

Frequency of identified SSR motifs
----------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	total
A	-	-	-	-	-	11	3	1	2	1	18
C	-	-	-	-	-		2				2
G	-	-	-	-	-	2					2
T	-	-	-	-	-	8	5	1	1		15
AG	-	1									1
AT	-			1							1
CT	-	2									2
GA	-		1								1
TA	-	1									1
AAC	1										1
ACT	1										1
CAA	1										1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	total
A/T	-	-	-	-	-	19	8	2	3	1	33
C/G	-	-	-	-	-	2	2				4
AG/CT	-	3	1								4
AT/AT	-	1		1							2
AAC/GTT	2										2
ACT/AGT	1										1