Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NC_018554
Parameters: 2 7 7 80 10 50 500
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 500
Length: 396947
ACGTcount: A:0.27, C:0.23, G:0.23, T:0.27
Warning! 95 characters in sequence are not A, C, G, or T
Found at i:6427 original size:8 final size:8
Alignment explanation
Indices: 6414--6453 Score: 53
Period size: 8 Copynumber: 4.6 Consensus size: 8
6404 AAATAATAGA
6414 TATATAAT
1 TATATAAT
6422 TATATAAT
1 TATATAAT
6430 AGATATATAAT
1 ---TATATAAT
6441 TATATAAT
1 TATATAAT
6449 TATAT
1 TATAT
6454 CTATAAACTA
Statistics
Matches: 29, Mismatches: 0, Indels: 6
0.83 0.00 0.17
Matches are distributed among these distances:
8 21 0.72
11 8 0.28
ACGTcount: A:0.50, C:0.00, G:0.03, T:0.47
Consensus pattern (8 bp):
TATATAAT
Left flanking sequence: Indices 5914 -- 6413
CAGCCTTAACCTGTCCCCAGACAGCCAGCCCTCACCAGGCTGCTGGAATTGCTAAATGCTCCGCC
ACGAAGCAAGCTCTCCCGATCCCGAAGACGACAGATGCGGAAGTGGCTAAAGAAGTCGGAGGAAG
AAAGTTGTTGGGCAATTGTATGCGCGAGGGTACATTATAAGTATTCTGAGAATTGGCAACATTGA
CAGAAAGGGGAAGAAAAGGGGGTAGGAATAAACTTTTTTAGGTGTAGCTATACTAAAGTAAGTAG
TCGGCCTAACCTTCGGTTCCCGTAACCAAGTTTTTCTTTCTCACTCCTTATGTTATGTACTTTTT
CTTACTTAATCCATACTTTTTTACCTTTTCTGAAGTGTGGGGCAAAGGGTGCCCTCTACTTATAC
TTCTAACTAAAGGCGAACTGCAGGCATTGCAAGCAAACAAAGCGCCCCCGCCCGTTTGAGTCGCG
AAGGGGCCGCTTGCTTAAAAAATTTATTTTATATAAAATAATAGA
Right flanking sequence: Indices 6454 -- 6953
CTATAAACTAAGAAAATCCGTTTTTTTTATCCAATTGTTCATTCCCGGGAAGAGGAAGAAGCAGA
TAGAGCAAAGGCCTCCTCTTTCCTTCCGTCCGCTCTTCCCGAAGTGGGCGAATTGCATGTAGAGA
TCCGCAGGGGCTTATAGTTTAATTGGTTGAAACGTACCGCTCATAACGGTTATATTGTAGGTTCG
AGCCCTACTAAGCCTACCACCCCCTTCTCTGCACCCGATACAAGGCAGTCGAAGTCCTCGCCACC
CTGCAGATCTCAATCTAGCGACGGCACCTGGAACCGCACAGCTTCCGCTGCCCTTCGGGCACGCC
TCCTACGCTCTTGCGGCATGCCCCCTTCGGGCAATACGGCTTTCGTGAGTAATACGCGAAGCAGC
TGAGCGATAGCTCTCTTCGATCGCTATATTCTTGCGATAGCGAAGGCGTAGTTCATCCTCTAAGA
GAGAGTAGATGCGAAGATTCGGATCGAAGATCTTCGCTTGGGCCG
Found at i:6430 original size:19 final size:19
Alignment explanation
Indices: 6406--6448 Score: 86
Period size: 19 Copynumber: 2.3 Consensus size: 19
6396 TTTATATAAA
6406 ATAATAGATATATAATTAT
1 ATAATAGATATATAATTAT
6425 ATAATAGATATATAATTAT
1 ATAATAGATATATAATTAT
6444 ATAAT
1 ATAAT
6449 TATATCTATA
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
19 24 1.00
ACGTcount: A:0.53, C:0.00, G:0.05, T:0.42
Consensus pattern (19 bp):
ATAATAGATATATAATTAT
Left flanking sequence: Indices 5906 -- 6405
AGCAGGCCCAGCCTTAACCTGTCCCCAGACAGCCAGCCCTCACCAGGCTGCTGGAATTGCTAAAT
GCTCCGCCACGAAGCAAGCTCTCCCGATCCCGAAGACGACAGATGCGGAAGTGGCTAAAGAAGTC
GGAGGAAGAAAGTTGTTGGGCAATTGTATGCGCGAGGGTACATTATAAGTATTCTGAGAATTGGC
AACATTGACAGAAAGGGGAAGAAAAGGGGGTAGGAATAAACTTTTTTAGGTGTAGCTATACTAAA
GTAAGTAGTCGGCCTAACCTTCGGTTCCCGTAACCAAGTTTTTCTTTCTCACTCCTTATGTTATG
TACTTTTTCTTACTTAATCCATACTTTTTTACCTTTTCTGAAGTGTGGGGCAAAGGGTGCCCTCT
ACTTATACTTCTAACTAAAGGCGAACTGCAGGCATTGCAAGCAAACAAAGCGCCCCCGCCCGTTT
GAGTCGCGAAGGGGCCGCTTGCTTAAAAAATTTATTTTATATAAA
Right flanking sequence: Indices 6449 -- 6948
TATATCTATAAACTAAGAAAATCCGTTTTTTTTATCCAATTGTTCATTCCCGGGAAGAGGAAGAA
GCAGATAGAGCAAAGGCCTCCTCTTTCCTTCCGTCCGCTCTTCCCGAAGTGGGCGAATTGCATGT
AGAGATCCGCAGGGGCTTATAGTTTAATTGGTTGAAACGTACCGCTCATAACGGTTATATTGTAG
GTTCGAGCCCTACTAAGCCTACCACCCCCTTCTCTGCACCCGATACAAGGCAGTCGAAGTCCTCG
CCACCCTGCAGATCTCAATCTAGCGACGGCACCTGGAACCGCACAGCTTCCGCTGCCCTTCGGGC
ACGCCTCCTACGCTCTTGCGGCATGCCCCCTTCGGGCAATACGGCTTTCGTGAGTAATACGCGAA
GCAGCTGAGCGATAGCTCTCTTCGATCGCTATATTCTTGCGATAGCGAAGGCGTAGTTCATCCTC
TAAGAGAGAGTAGATGCGAAGATTCGGATCGAAGATCTTCGCTTG
Found at i:63654 original size:15 final size:16
Alignment explanation
Indices: 63612--63654 Score: 52
Period size: 18 Copynumber: 2.6 Consensus size: 16
63602 TCCTACCTTA
63612 ACAGTCGATCATGCGCTC
1 ACAGTCGATCATGCG--C
*
63630 ACACTCGATCATGCG-
1 ACAGTCGATCATGCGC
63645 ACAGTCGATC
1 ACAGTCGATC
63655 TGTCCATCCG
Statistics
Matches: 23, Mismatches: 2, Indels: 3
0.82 0.07 0.11
Matches are distributed among these distances:
15 9 0.39
18 14 0.61
ACGTcount: A:0.26, C:0.33, G:0.21, T:0.21
Consensus pattern (16 bp):
ACAGTCGATCATGCGC
Left flanking sequence: Indices 63112 -- 63611
TTGCATGAAAAAACTCAAAAAAGAATAGGTGATCGTAGGTCARCYYGTGGGTAAGTTCCGGGCTT
TCATTGATATTTTCTCGTTCATGATCTCTAATCCTTTGAGTAGATTGGGCAGGGGTAAGACTATG
CACATAGCTTCGGTTCCGTCTTGTTTGCCAAGGAGATATGGTTGCTTTTCCTTCTTCAGTAGGCT
TTCCCGCGGGTTCGGTTACAGATAGGATACACGGGTCAAAGGGAAGGCTTGAGTTCAGAGACGAA
GTTGGCTTTGAAGGTACAAACTTTCAGACAGTTCCTTACTTTCTATTCTCTAATCTCGTATGGCA
GCTTTCAGTCCCATCTTCAGTTTCGGGATATTGCTCCTATGCCTCTTCGAAGTGAAGCCCTTATA
TCGAATGATTCAAGACATTTGATTTTATAATAGAAATGAGAGGACAGCCGAATTGACAGAAAATA
GTCTGAATTTGTTGATCAACTCTCTTTGTTGAAGGTCCTACCTTA
Right flanking sequence: Indices 63655 -- 64154
TGTCCATCCGACTACATTCACTGGGGGGTGAGGTTGTCCAATTTCAATTATGTGCCGCTCGTTGA
CATCTAGTTTCCATTGCYGGTGTGAGAGATCTTCCTTCGGTTCTAGTTAAGTATGGCAGCTTGAG
GTCTCCTATTTAACTTTCACCAGCCATTGGGAACTCAAATAAACTTTCATTTAACGGCAGGCGAG
AAAGGTTCTAAAAGAAAGAAAGGTAGAAGGGGGGTTTTCTCCCGTTTCGGGGTTCTCTTGTGGAC
TGGCTGTTGACTGGCCGGGAGAAAACCGGTGCTTTTAGCTTAAACGGATTTTCACTGGATCGGAG
CCTTTCGGAAATCCTCCCCTTTTGGCTTCACTTGAGCGGTTGACGCAATCCAAGAGGAAGAGGAA
GCTAAACCCGTGCTGACGAATAACCAAACCCCTTAATTCGTCGAGTAAAGTAAATAGGGAAGGTA
TAGGTTTGTTATGAATGACCCCGTATCGAATACAGGTAATAATAT
Found at i:67809 original size:13 final size:13
Alignment explanation
Indices: 67791--67816 Score: 52
Period size: 13 Copynumber: 2.0 Consensus size: 13
67781 CAGGCCTCTC
67791 CTTATTCATTCTA
1 CTTATTCATTCTA
67804 CTTATTCATTCTA
1 CTTATTCATTCTA
67817 TAGGGCGGGG
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 13 1.00
ACGTcount: A:0.23, C:0.23, G:0.00, T:0.54
Consensus pattern (13 bp):
CTTATTCATTCTA
Left flanking sequence: Indices 67291 -- 67790
CCTCACTGACCTGAGCAATTTCGATCACCTAGCAGGCCTTAAATTTGGTAGGTAACATCGCCGAA
GCGTATCATCTGATTTTACTACGAAGGAAGGAACTCGAAGTGAGACGGCGCCGTCTTGTCCAACG
CAACGATATGGCCCTCTATCATCTTCTATCTGGTAGACTTGGAAAAGGGGCCCCGACTTTTTTCC
AGAATTAGAGTTCGACCGCGGCTGCCCCCTTTTTTTTCCGCACCAATCCTTATTTTTTACTATAT
ATTTTGGGGGTGTATAGCTCAGTTGGTAGAGCATTGGGCTTTTAACCTAATGGTCGCAGGTTCAA
GTCCTGCTATACCCAAACCTACCTTACACTATACTATTAGTAAGGATGCGTAGTAGCGTTCAAAG
ATCACTCTTTGGCCTTTAGACTCGCTTCAGCGACTTCGCCCTTTAAGTGACAAGGGGGGGGTTGA
GGTAAGGAGTAGTATAAGAGTGGCTCGGTCATCAACAGGCCTCTC
Right flanking sequence: Indices 67817 -- 68316
TAGGGCGGGGCTGCGGACCAACAATTCAGCAAAAGGGCTTAAAAGCTCCTTTATCAAACCTTCCC
CTTTGAATAATAATAAGGTAAGCTTGGGTTCCAAACTATATGCGGTCTCGCCATTCTTTGTTTGC
ATTCAAAGGTCTTGTGCCTGCGCTATCGAGTCACGTGCCTAACTTCCAAAGAATGAATCATATGG
TAGAGGAGCTAAAGTGGCCGGCGGCGGTGTAGAGCTATAAGGAGCGAAGCTCACACACACCGGCT
GATGGAGGGCGGGATCGCATTCACTTGCTTGCGGCCCGGCTCCATAATAGTGGAAAGCGGGCGCG
CCCCCATAACCACACGGGAGGGTAACGAGATTCAACGGGATGGTCACGCTTTTCGAGAACGGTTT
TTCCCTCATAAAGCAGGTTCCGTGAGTCAAAAGACCCTAAACAAGGCAAGCCGAAAAGATTCTTT
TTCTCTTCCGCACATCGATGTTCTGGTGGACAACACCGCTGGACA
Found at i:104176 original size:39 final size:39
Alignment explanation
Indices: 104121--104199 Score: 140
Period size: 39 Copynumber: 2.0 Consensus size: 39
104111 CCCATCCTTC
* *
104121 AATATCATGATTGGGTCGACCGGGCCAGATCATGAGTGA
1 AATATCATGATCGGGTCGACCAGGCCAGATCATGAGTGA
104160 AATATCATGATCGGGTCGACCAGGCCAGATCATGAGTGA
1 AATATCATGATCGGGTCGACCAGGCCAGATCATGAGTGA
104199 A
1 A
104200 TAGAAAATCG
Statistics
Matches: 38, Mismatches: 2, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
39 38 1.00
ACGTcount: A:0.30, C:0.19, G:0.29, T:0.22
Consensus pattern (39 bp):
AATATCATGATCGGGTCGACCAGGCCAGATCATGAGTGA
Left flanking sequence: Indices 103621 -- 104120
CTTTTCTCCGCAAATCACCCCTTCCCAACCAGCCCGCCCGATCCATTTTGTAAGATCGGCTAATT
CAAAAGGGTTAATCTGGTCCGAAGTTGTCGGAACGAATCGTTTGCTTTATCGAACAAAGCTTTAT
TAGGGTAGGGTCTTGGTTGGCCCCCTATTTTCAACCATTACAGCTGGCGTCGACCAGCTTTGCGA
TACGGACGGACACGAAGAAGAACGCAGGCAGCGGAAATGCAAAAGAGAAGAGCAAAGATTCCCGA
CCCAGAGCATGTTATTGACTCAACCACAAATCTGTTGAATGAAGGTAGCTTGCTTACTCTCAGCC
ACTAGTTAGAAGGAAATCCCTTGACTTCGCTTATGCCCTTATGGCCCTTATGCAGTACAGAAAGC
AAGTGAGGCGGGCTAAGATTCCATTCGAAGTAAGGTGACAGGATTCGATGTTGCACCATCTTCAA
CTCTTCTCTGGATCCGGAGTTTTTCGAGAAAAGGTCCCATCCTTC
Right flanking sequence: Indices 104200 -- 104699
TAGAAAATCGAAAACGTACATAGCAGTTCCAGCCGAAATACTTGGAATAATTCTACCACTTCTAC
TAGGAGTAGCCTTTTTAGTGCTAGCTGAACGTAAAGTAATGGCTTTTGTGCAACGTCGAAAGGGT
CCTGATGTAGTGGGATCGTTCGGATTGTTACAACCTCTAGCAGATGGTTTGAAATTGATTCTAAA
AGAACCTATTTCACCAAGTAGTGCTAATTTCTCCCTTTTTAGAATGGCTCCAGTGACTACATTTA
TGTTAAGTCTGGTTGCTCGGGCCGTTGTACCTTTTGATTATGGTATGGTATTGTCAGATTCGAAC
ATAGGGCTACTTTATTTGTTTGCCATATCTTCGCTAGGTGTTTATGGAATTATTATAGCAGGTTG
GTCTAGTAATTAGGGGGCGGCCGTTCGGTCGCCTATGATACTAGGACCAATAGGTCAAAAATGGG
TTTGTGCCGCAGGTGTTGAACGATCTACTCTACACAGGTGTGGGC
Found at i:131149 original size:15 final size:17
Alignment explanation
Indices: 131114--131150 Score: 60
Period size: 17 Copynumber: 2.3 Consensus size: 17
131104 ACCGGTATCG
131114 TATAATATATATATATA
1 TATAATATATATATATA
131131 TATAATATATAT-TAT-
1 TATAATATATATATATA
131146 TATAA
1 TATAA
131151 AAGTCGCGGT
Statistics
Matches: 20, Mismatches: 0, Indels: 2
0.91 0.00 0.09
Matches are distributed among these distances:
15 5 0.25
16 3 0.15
17 12 0.60
ACGTcount: A:0.51, C:0.00, G:0.00, T:0.49
Consensus pattern (17 bp):
TATAATATATATATATA
Left flanking sequence: Indices 130614 -- 131113
TGCCTCTATCATCTACGTCAATTTCTTCTTCAATAGATTCCCTCACTTCTGGCCCGAGAGAAAGT
AGGCCAAAAACGTGGGATGTAAAAAAAGGTGTATTCTAGGGCCAGGTGATGTCAGGTATACAGGA
TGAGTCTCACAGTCCCCACAGCCTCCACGCGAGAACGCATCCCCTTTTCCGTGATGATGCTTTGT
TAATCCTTTACTGGAAGTCTGCTTTTAAGAAAACCCTGCATAGAATAGGTCACATAAAGTGAAGG
CTGGTACCCGAATCAATCCACCATGCATAAGTAGAAAAGTAAAAAAAAAGCAACTTTTCAGAAAC
AAGGGCATAGTGATTGCCTTCCTTCACTCCTTAAAAAACCGAAGCTTTGAACTAAATATCGTACA
ATCCTTTTTTATAGTTGCAAAGCATAGCGAGAGAAAAAGAACAAGAAAGTTGACCGTGACGGTCG
TAGCTCTATCAAGTAGGTACGCTAAACACTCATAGACCGGTATCG
Right flanking sequence: Indices 131151 -- 131650
AAGTCGCGGTGGAATCCATTGCGATCTTGGGCATCGCCAAAGAAGGGTGTTCTCAGCGCCTATGC
TTAACACGGCTCCCATGATAGTAGCAGAAAACGAGTTGTGCTGGTGATGTGATCGGACCATTTCC
CCCCGGGAAATACGGTCACAAGTTCATACTTTCTTTTTTACTAGTCATTTTTTACTAGAGTAAGT
CAAGATCAGAGCAGGCACAACGACGCAATTCTCAGGGGCGTGTCTGGTGCTATCGTATATAAGAG
AAAGGTTGGGTTGCATTTAGGAAGGATCTTTCTCTTTAACTAGAAATATCTTAAGATAAGAAAGC
GTAAAAAAGAAAGGTTTTGATTCGACCTGATTAAACAAAGAAAAAAAAGCTTTCTCCGCGTCAGG
CTGTTGATGTAGTTGCTTGTACTTTTCATTTTATGTCGAGATTTAGTTGGTGTTCAGTGTACCTG
TTGAAGACCTTAACGTAAGGAACTTAGTGCAAAAGTAAGTGGCGG
Found at i:183368 original size:14 final size:14
Alignment explanation
Indices: 183343--183376 Score: 52
Period size: 14 Copynumber: 2.5 Consensus size: 14
183333 AATCGCTCAT
183343 CCGTCC-ACGAATA
1 CCGTCCTACGAATA
183356 CCGTCCTACGAATA
1 CCGTCCTACGAATA
*
183370 CTGTCCT
1 CCGTCCT
183377 CTAGCTTCTG
Statistics
Matches: 19, Mismatches: 1, Indels: 1
0.90 0.05 0.05
Matches are distributed among these distances:
13 6 0.32
14 13 0.68
ACGTcount: A:0.24, C:0.38, G:0.15, T:0.24
Consensus pattern (14 bp):
CCGTCCTACGAATA
Left flanking sequence: Indices 182843 -- 183342
GGATTAAAGCAAGGAAGCAAGAAAAGAGATAAGCGTTAGAGGGAGGTGGGAGGATTCACTCTTGC
TATGCCGCACTCTCATACTTTTGAGTAAGGAATTCCCTGCAAGGCAGTTAACGGCTGTCGGATAG
GGCATCGGGAAGAACATATGGAAAAGAGAACCTGCGAGTACTATTCAGTTAGGATGTGCCCCCCT
GAAATTGTTAGATATTTGCCTTTATGACTCGTCTTCTTTTATAGGGTCTATCCGGGGATACTAAG
CCTGGAATAAGTTTCGATCTATGGCAATTTCTTTGTAGTGGCCAGTTAAAGCTATCAGATATAGG
AGAGACTACCTACTTCAAGTTCAAGGCAGGCTAGCTCAGTACACGATTCCCTTCCTTTAATGTGC
AATTCCCGTCCTTTAAATAGAGCGACTTCCCGCTCTTCTGCCTGTCATCTGTCAACTGGTAACGG
TCGCATCTGTCCAGTAACTGTCCTATAGGCGGTCCAATCGCTCAT
Right flanking sequence: Indices 183377 -- 183876
CTAGCTTCTGTTATGAGTGAATTTCTATGGCCTATTTTATCTAAAAAGAAGCCCTGTGAAAGCGT
CAGTAATGGGGAGCGGTCCATTAACGTTGCTTAATTGGCCTTAGCGTTTCGCACTAAGTAAGCAA
GCTACCTTATTTATGTGCTCTAGTCGAACAAGCAAGCCAGCCTAGCAGAGTAAGCCTTCCCTCTT
CTCTTCACTGGCTCTGATCTCATCAGACTCGTATCCAGCCTCTCTTTCCTCGGTCTCGGTGCTCG
GTCCAGGAGAAGAGAAAGACTCGGATCCAGGGAGGGAAAAATACCGGTATCCCAGCTCCATTTCA
AGCCTAAGCTCTCCCTCCGCTTCTCGATCCCCAGCTTCCGCTGCTAAGCAACCATCTTCTCTCTC
TTCGTCTCCCACTCCTTCTCCCATCACTGGGTATTGGACACCAAGAGGCGGGTACTGAACCCCGA
GAGTGAAGGCGATTCGCCGAAACCACAAGTGTTATCACGTATCTA
Found at i:209197 original size:18 final size:18
Alignment explanation
Indices: 209176--209218 Score: 54
Period size: 18 Copynumber: 2.4 Consensus size: 18
209166 CAACCTTGTT
209176 GACTATGACAACAG-TCGC
1 GACTATGA-AACAGATCGC
209194 GACTAT-AAACAGACTCGC
1 GACTATGAAACAGA-TCGC
209212 GACTATG
1 GACTATG
209219 GCAGGGCGGT
Statistics
Matches: 22, Mismatches: 0, Indels: 5
0.81 0.00 0.19
Matches are distributed among these distances:
16 5 0.23
17 1 0.05
18 16 0.73
ACGTcount: A:0.35, C:0.26, G:0.21, T:0.19
Consensus pattern (18 bp):
GACTATGAAACAGATCGC
Left flanking sequence: Indices 208676 -- 209175
TACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGA
GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTAC
CTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCTTATAACACTTCT
CCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCACTTAGCAGAGT
CCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAATCAAAAGATAGGA
GAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTCTCAAG
CGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGGGTACGGTCAGTTCACCGGGAGGAT
CGCCCTCCCAATTCGAAGTTTTTTCCTGGAAGTTTCAACCTTGTT
Right flanking sequence: Indices 209219 -- 209718
GCAGGGCGGTACGCTCTGCTCTCTCGCGACCCCTACTCTAATCAAAAGACTAAAGGCCCCTTAGG
TCGCCAAACTACGACGAGAGTTTCGCCTTTTGAAGCGCCAGTCGCATAGGGCGACCGGGCCAGGC
CGAGTCAGAAAGGCTTTGATGACTCAAGGTTCATATTAGGGAAAGGAGAGTGAGGGGAAGAGGGG
GCAGCCCTCGGCCCGATCATCCAATTCGCTCCAACAGATAGGCATGGTTCTGTAGTCAAAGCAAC
TTCGTCACTTTCGTGTACCCATCGGACGGCAGCCCTTTCGGGGGTTCCTTAGGGACCGATTCACT
CTGCGTAGATTGACTGAACGCAGAAAGCCTTCCACTGGCAGGCGATCGTGTTTTTCACAGGATTT
CTCGTTACTCATGTCAGCATTCTCACTTCTGATATCTCCAGGTGTTGTCACCAAAAACCTTCCCC
GATTGACAGAACGTTCCGCTACTGACACTTGAAAAAGAAGCTTTC
Found at i:218719 original size:17 final size:17
Alignment explanation
Indices: 218697--218733 Score: 56
Period size: 17 Copynumber: 2.2 Consensus size: 17
218687 GCACAGATTC
*
218697 CCTATAAAGATAAATTT
1 CCTATAAAGACAAATTT
*
218714 CCTATAAAGACAGATTT
1 CCTATAAAGACAAATTT
218731 CCT
1 CCT
218734 CTCTTCCCGA
Statistics
Matches: 18, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
17 18 1.00
ACGTcount: A:0.41, C:0.19, G:0.08, T:0.32
Consensus pattern (17 bp):
CCTATAAAGACAAATTT
Left flanking sequence: Indices 218197 -- 218696
ACTCCTAGTAGGCCACGAACTCCCTTTCAAGCTTTAACCGACCCGAATCAAATCCAGATGCCTCA
CCAGATAGTTCTCCTTTCATCTGTCCGATCAGGCAGCCAATTCTATGCCACTAAAGCTTCATGCC
ATTGAAGACTGGTCCCGAAAGCGATTAGAAAGCGAACTAGGATCTGCAAGATTCGACTTTGATCC
GCCTATGAACCTTGGTTCACGCTCTACGTATCTTATTCTTTCAAGCTTTCTCGAGTCACCCTAAC
GTAACGGCTAAGAGAACTTGGCTAACTTCGATCAATTCCACGACTTTCCATCCTTCTTGTGTTGT
GGGATGTGAGTCATCAGTTCTTTCCTCCGCCTGATAGTTTATTCTCGAGGATCACTGAACTTGGC
TTACTTCTTACTGAATGCCGTACTTAGCACTCGGGGCGAGCTCTTAGCGATTAGTCAGTCCGGGT
CCAGCTAGTCTTGCACTTTCAGACCCAAACAAAGGGCACAGATTC
Right flanking sequence: Indices 218734 -- 219233
CTCTTCCCGAATGCTTTCCTTAGCTAATACTGATTGATTCACCGCATCTTCTCCATTAGGAGATC
TAACCAAGCACTCGAAATGCGACATTGACTAAAGAAGGTAGACAAAAAGGCAAACTAGAGAAAAA
GCCAAGCTGACTGAATTGAATCTTTCAGTGGAATTGGGGCTTACCTTATATCATATCCTCTCTCT
TTCAAGCACAGTTGAATGAAAAAAGCGTACCTTCGAAGGCATGATTGCTGCGATCAAGAGCTGCT
TAACATCATTGAGAACAGGAGCTCAGAAGATTTGGTGGAGGATAAAAAGTGAACCAACACTGGGA
TCCGATCATAGCCGCAGTGAAGTGTTGGGATGCAAAGACGATGGTTTTTAGATTCGGCAAACATG
AGATGTGTCCCACACTTGAAGAAGTACATCGAATTTTGGAGATATCCCGTAAATTCCTTTTTGTA
CCTAGAGAAGGACGACCGAGAAAAAAAGGCTTCGCGTTCTCCAAG
Found at i:269872 original size:20 final size:20
Alignment explanation
Indices: 269847--269884 Score: 60
Period size: 20 Copynumber: 1.9 Consensus size: 20
269837 TCTTGTTTTA
269847 GTAGCTAAGGAGTT-CTAGTT
1 GTAGCT-AGGAGTTGCTAGTT
269867 GTAGCTAGGAGTTGCTAG
1 GTAGCTAGGAGTTGCTAG
269885 CAGCTATGAG
Statistics
Matches: 17, Mismatches: 0, Indels: 2
0.89 0.00 0.11
Matches are distributed among these distances:
19 7 0.41
20 10 0.59
ACGTcount: A:0.24, C:0.11, G:0.34, T:0.32
Consensus pattern (20 bp):
GTAGCTAGGAGTTGCTAGTT
Left flanking sequence: Indices 269347 -- 269846
TTTTCTCCAACCTTCGATGATCCTCCTGCAGGCAAATCATCGAAGTCAAGAAAAGAAGAAGTGAT
GGGCCAGGCAGCAATGCTAGGTCCGAGGAAGAGACCTGTAGGTTTGGAAAGCCTGTCGATCCATC
CTGATTAACTTACGCAATTTCTGACTAGAGAGAGGACTTAGATCGGAGAGGAGCAGCTCTTTTCT
TTTTAACAGAAAGCAGTGATGAATGGGACAGAGCTGCTACAATAGCTTCAAGCTGGAGCTGCTTT
ATGTATTGGAGCAGAGGTGGCAGTTCAGACAGCAGCAGGAGCAGGACCAGCAACTAGGGTTGTTT
TGTTCACAGAGCAGCCGTCTTTCCCTCTCAAGCGGAGAAGACTGGTTACATGTCCGATCCGGTAG
GGATGGTTCTTCTCGACAGATTAAGCTACTTACTATAGTTAGGGTATTGAACAACGGGTGGCAAC
TTGCCCAATAAGAAAAGTCGCCCGAGTGAAAGAGCTCTTGTTTTA
Right flanking sequence: Indices 269885 -- 270384
CAGCTATGAGTTCCGAGTTGACGAGATCATAAACAAATCTGTCTGGGACTGGTGACACCTGTACC
ACACTCTATGGCACACACCCCTCGTTGTAGTAGACGAAGATGGTCACCTAGGATAGGCAGACAAC
CCTGAACCTTAGAAAGTCGCCGGCGGAGACGCTACGGGAGAACCGCCTAGGATGGCGTAAGAGAC
TCGAGCATCTCTTTCTTCAATTTGGGTTTGTGCATTTGTCTTTCAAATAGGTCAAGGGTTCAGAC
AGGAGATGTGCTTTAGCCAAAGAAGCTTGGGCACCTGCTCCAATAAAGCTAAGAGGACTAGCTAC
GGTGTGGGCACCAGATCCACTCAGTGAGGCCGGGCAAGACTTTACGTCCGATATAGTAGTGTCAG
ACATTTGTCATACTTAAGCAGTGGGATAGACTCCTTCAAATGGAAAGATAGGAGATGTTTAGCCA
GTACAAGCTGTGTTTGTGGCACCCATCCGGGTGGAGTAGCCAGGA
Found at i:304687 original size:22 final size:23
Alignment explanation
Indices: 304654--304707 Score: 69
Period size: 22 Copynumber: 2.5 Consensus size: 23
304644 GGAGGTTACT
304654 CTCGT-CCTACACTAG-GTCACC
1 CTCGTCCCTACACTAGCGTCACC
* *
304675 CTCGTCCCTACACTAGCTTCTCC
1 CTCGTCCCTACACTAGCGTCACC
304698 CTC-TCCCTAC
1 CTCGTCCCTAC
304708 GGTCGAGTTG
Statistics
Matches: 29, Mismatches: 2, Indels: 3
0.85 0.06 0.09
Matches are distributed among these distances:
21 5 0.17
22 17 0.59
23 7 0.24
ACGTcount: A:0.15, C:0.48, G:0.09, T:0.28
Consensus pattern (23 bp):
CTCGTCCCTACACTAGCGTCACC
Left flanking sequence: Indices 304154 -- 304653
GCTCCTCCGGCCGCCTATGGAAGTAGTAGAGCCACCTAAAGTGCTTTATAGAAAGTAGTCCCATG
CATTCCTACAAATGTAAATGGTATCGCTAGACGGTAAGGAAAGAGAAAGGGCCTTTCAGCCTCTG
CTTGAGTTCCTCTTTTTTATGTTTATGGTCTTTCTCGAGGCGCTGCCTACCTACAAGGCAAGATC
AATTGAACCTTCACCTTAAACTGCGACCGGTCTAAATGCAGGCGCTTCGGGCACAGTAGTTGTTA
TAGATCAATCCATGGGAGTCTCCGACTTGCTACCCCTTCTCCAGAGCTGCAAAAGAGTTTGACTT
CTATTATCTTACGTATAATTTCTAGCAATACTCTTAGTAACTCTCTTTTTATAAGATATTATAAA
AAGTCTTTTGGCATACCAATCAGTGAAACTCTAAGCTATCACAGCTACATCCACTCATAAATGCT
CCGCTGCTCGGGGAACACTCGTTACGAAGAAAAGGGGAGGTTACT
Right flanking sequence: Indices 304708 -- 305207
GGTCGAGTTGCCCCGCCCATTTCCTCTCAGACAAGCACGTAACCATCCCCAGTCGAGCTAGCGGC
TCTATCTTCTACTGATATCGAGCTAGGTCCAGATAGCTAAATTGATTGTATGACCATTTCTGGAC
GTTTCTACGGTTTATGGCCAGGGATGCAATCCTATCGATCGATTTCCCTATAGCTTTTTGCCCTC
TCGGCGTAAGATTTTGATTGGAAGATTGGGTGAAGCCTAGCTTCTTTCTTTCTTGCCTCTGCCAA
AACCAATAGGAATTGGAGCTCCTTCTGAGTAGAATGAGGAGAGTGCAGACGCTTTCACAGATGCC
CGGTATCTTCCGGAGCTGTAATCTTTACACACTAAGTAAGCAAGCTTTGGTTGGCTCTATTAACT
CAAGATATCCATCATCCCGCGCTATACGGATCGAAGCCTTCCACTTTAGGAATAGGTTTAATTGT
TTAATGTGAACGCTAAGGAAGAGAAATCCTTACCGGAAAGCCGGG
Found at i:352346 original size:18 final size:18
Alignment explanation
Indices: 352325--352367 Score: 54
Period size: 18 Copynumber: 2.4 Consensus size: 18
352315 CAACCTTGTT
352325 GACTATGACAACAG-TCGC
1 GACTATGA-AACAGATCGC
352343 GACTAT-AAACAGACTCGC
1 GACTATGAAACAGA-TCGC
352361 GACTATG
1 GACTATG
352368 GCAGGGCGGT
Statistics
Matches: 22, Mismatches: 0, Indels: 5
0.81 0.00 0.19
Matches are distributed among these distances:
16 5 0.23
17 1 0.05
18 16 0.73
ACGTcount: A:0.35, C:0.26, G:0.21, T:0.19
Consensus pattern (18 bp):
GACTATGAAACAGATCGC
Left flanking sequence: Indices 351825 -- 352324
TACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGA
GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTAC
CTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCTTATAACACTTCT
CCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCACTTAGCAGAGT
CCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAATCAAAAGATAGGA
GAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTCTCAAG
CGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGGGTACGGTCAGTTCACCGGGAGGAT
CGCCCTCCCAATTCGAAGTTTTTTCCTGGAAGTTTCAACCTTGTT
Right flanking sequence: Indices 352368 -- 352867
GCAGGGCGGTACGCTCTGCTCTCTCGCGACCCCTACTCTAATCAAAAGACTAAAGGCCCCTTAGG
TCGCCAAACTACGACGAGAGTTTCGCCTTTTGAAGCGCCAGTCGCATAGGGCGACCGGGCCAGGC
CGAGTCAGAAAGGCTTTGATGACTCAAGGTTCATATTAGGGAAAGGAGAGTGAGGGGAAGAGGGG
GCAGCCCTCGGCCCGATCATCCAATTCGCTCCAACAGATAGGCATGGTTCTGTAGTCAAAGCAAC
TTCGTCACTTTCGTGTACCCATCGGACGGCAGCCCTTTCGGGGGTTCCTTAGGGACCGATTCACT
CTGCGTAGATTGACTGAACGCAGAAAGCCTTCCACTGGCAGGCGATCGTGTTTTTCACAGGATTT
CTCGTTACTCATGTCAGCATTCTCACTTCTGATATCTCCAGGTGTTGTCACCAAAAACCTTCCCC
GATTGACAGAACGTTCCGCTACTGACACTTGAAAAAGAAGCTTTC
Found at i:373727 original size:17 final size:17
Alignment explanation
Indices: 373705--373739 Score: 70
Period size: 17 Copynumber: 2.1 Consensus size: 17
373695 AAAAGAAGCT
373705 ATTGAGTTGGCTTCTTG
1 ATTGAGTTGGCTTCTTG
373722 ATTGAGTTGGCTTCTTG
1 ATTGAGTTGGCTTCTTG
373739 A
1 A
373740 AAGAGATGAT
Statistics
Matches: 18, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
17 18 1.00
ACGTcount: A:0.14, C:0.11, G:0.29, T:0.46
Consensus pattern (17 bp):
ATTGAGTTGGCTTCTTG
Left flanking sequence: Indices 373205 -- 373704
ATACGAATCATAATCGATGGTGAGAAGTGGAACACCTCCTTCAGACCAACTACAGAGTAAGCTTC
TACCGCGCCCAATAAGGGCGGCTTATCCCGGTTCTGGTTCCCTCCGTGCGTGTATCCATCCTTTG
ATCTCATCTGTATATCATTTCTAGTACTACCTTGTGCTATTTTTAGGCTCCACTGAGTCAGCTCG
TCCACTTTATGTTATAGTTGCAAGCTACCTATTATCGTCGATCAGCAACCTTCTCTCACAGTGGC
TTAATGAGAATTTTGTATGATAATTGTGTGACGCCATGGCTTCGCCTTTGACGCTTTCGTCTTGT
TGTTTGGTACAGTAATAAGCAGATCTGCGAAACCTCTTACCCGGATCTTACCATTTGCCTTCCTG
TTGAGGTTGAATTACGTGGTATAAGCAAGCGAAGCTTCGCTTGTAGTCCCCATCTGTTCCCAATA
ACTAGCTCAGTTGCAGCAGAGGGCATAGCGGTTCTAAAAGAAGCT
Right flanking sequence: Indices 373740 -- 374239
AAGAGATGATGGAAGCAGAATAAAGTGATAGGCGGAGTCAGATATTCGACTGGAAGCCTCATACC
GATATGAGATTTATACTCTAATATTCAATTTCGTGTATGGGGCATGCACTTGTTCCACTTTCACG
TTGGTCAAGCTACTATAGCGGAATGTAACCTCAAGAATCCACTCTTTTTTTTAATGAAATGCTTT
TTTTCTCAATTTACCGTCCTTTTCAATAGACGTCCAGTTAAGATTCCGGCTGGACGAAAGCATAA
ATTATATAGAAAGTATGCCCTATGCTTCGTGAATAAACCTAGGTAAAAGCGAAGTTGTCCATGTC
AGGGCAGTGGGAATACATAGTTGGAGCTACGAGTTCCAATCGATTAATAAGACAACCGACTTCGA
TCAAAAAAATGAAAGCTAGCCGAACCAAAGATGTTGCAGGTTACCAAACCATTAAATCTGAGTGA
ATCGAGGCGGCGTAGACATTAAATCAAAAGTCTAGTGAGAGCGCA
Found at i:391058 original size:18 final size:18
Alignment explanation
Indices: 391037--391091 Score: 101
Period size: 18 Copynumber: 3.1 Consensus size: 18
391027 AATAGAATTA
*
391037 CAACTCGAAAAGGAAAAG
1 CAACTAGAAAAGGAAAAG
391055 CAACTAGAAAAGGAAAAG
1 CAACTAGAAAAGGAAAAG
391073 CAACTAGAAAAGGAAAAG
1 CAACTAGAAAAGGAAAAG
391091 C
1 C
391092 TATTAAAATT
Statistics
Matches: 36, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
18 36 1.00
ACGTcount: A:0.58, C:0.15, G:0.22, T:0.05
Consensus pattern (18 bp):
CAACTAGAAAAGGAAAAG
Left flanking sequence: Indices 390537 -- 391036
CTGTCTCAACCCTGACTGACGACTAGCTTTACTTGATAGAGTTGCCTTCCATGCCCGGTTAAGTT
CGCCCTTAGGGGAAAAAGCCTTTCCTTGCCTTACCGGACAGTAAGAATTTAATTGCCTTGAAAAC
AAAACAGAAGTACTACTTTGGATACGCTATGATTCGCATCTCTCATTAAACTTTTATAATACAAT
CTATGTCCTACTCTTTTAGTTTTAGCTTTCTTCATTGAGTAAAAGGAAATTAGCCTTTCAAACAG
AAGGCATATGATAGCTCATTCCCGGACTTATTTATATCGTAAGAGAGAGAGAGAACCTCCTATGC
CCAAAGACTCCCATGCTTTCCGTTGGTCAACAACCAACCACAACTCACTATAATTCTTCACTACT
CGTACAGGAAGGTAAGAAAAACTTGCTTTTCTGGAGGGAATCAAAATGACGTAAATCCCAATTTT
ATGACCCAGGAACAGATTTTGCTATTACAAGTAGAAATAGAATTA
Right flanking sequence: Indices 391092 -- 391591
TATTAAAATTACAACTCGAAAAGGAATTAAAAGTAGAAATAGAATTACAAGTAGAAAAGGAAAAG
CTATTAAAATCGCTTGAGTCGCTGCCTTGTGAAAGAAAACATCATATGTAAGTAAGTAGCATCTC
GAATAGAAATATCCCTTCCAAATATCTAATATAAAGTTAGATTTCTATTCAAAAATAATAAATAG
AAATTGCGTAGCGTAAGAGAAGAAAATGCCCAAAAGTCCCATGTTTTTCTTGGTTGGAAAAGCCC
AACCGGCGACTTCCGTCTTCCTGAATTGGGAGAGCAAGAACAAGTCCCTCTTCTTTTTTTGGGGG
GGGGCGGAGCAGTTAAAGAATGAACCAACCCAAATGATTGTTCTAGAATGGCTATTCCTCACAAT
TGTTCCTTGTGATGCAGCGGAACCATGGCAATTAGGATTTCAAGACGCAGCAACACCTATGATGC
AAGGAATAATGGACTTACATCACGATATCTTTTTCTTCCTCATTC
Found at i:391114 original size:66 final size:65
Alignment explanation
Indices: 391032--391166 Score: 177
Period size: 66 Copynumber: 2.0 Consensus size: 65
391022 GTAGAAATAG
391032 AATTACAACTCGAAAAGGAA-AAGCAACTAGAAA-AGGAA-AAGCAACTAGAAAAGGAAAAGCTA
1 AATTACAACTCGAAAAGGAATAA--AACTAGAAATA-GAATAA-CAACTAGAAAAGGAAAAGCTA
391094 TTAA
62 TTAA
* * *
391098 AATTACAACTCGAAAAGGAATTAAAAGTAGAAATAGAATTACAAGTAGAAAAGGAAAAGCTATTA
1 AATTACAACTCGAAAAGGAA-TAAAACTAGAAATAGAATAACAACTAGAAAAGGAAAAGCTATTA
391163 A
65 A
391164 AAT
1 AAT
391167 CGCTTGAGTC
Statistics
Matches: 62, Mismatches: 3, Indels: 8
0.85 0.04 0.11
Matches are distributed among these distances:
66 58 0.94
67 2 0.03
68 2 0.03
ACGTcount: A:0.57, C:0.10, G:0.17, T:0.16
Consensus pattern (65 bp):
AATTACAACTCGAAAAGGAATAAAACTAGAAATAGAATAACAACTAGAAAAGGAAAAGCTATTAA
Left flanking sequence: Indices 390532 -- 391031
CCTTACTGTCTCAACCCTGACTGACGACTAGCTTTACTTGATAGAGTTGCCTTCCATGCCCGGTT
AAGTTCGCCCTTAGGGGAAAAAGCCTTTCCTTGCCTTACCGGACAGTAAGAATTTAATTGCCTTG
AAAACAAAACAGAAGTACTACTTTGGATACGCTATGATTCGCATCTCTCATTAAACTTTTATAAT
ACAATCTATGTCCTACTCTTTTAGTTTTAGCTTTCTTCATTGAGTAAAAGGAAATTAGCCTTTCA
AACAGAAGGCATATGATAGCTCATTCCCGGACTTATTTATATCGTAAGAGAGAGAGAGAACCTCC
TATGCCCAAAGACTCCCATGCTTTCCGTTGGTCAACAACCAACCACAACTCACTATAATTCTTCA
CTACTCGTACAGGAAGGTAAGAAAAACTTGCTTTTCTGGAGGGAATCAAAATGACGTAAATCCCA
ATTTTATGACCCAGGAACAGATTTTGCTATTACAAGTAGAAATAG
Right flanking sequence: Indices 391167 -- 391666
CGCTTGAGTCGCTGCCTTGTGAAAGAAAACATCATATGTAAGTAAGTAGCATCTCGAATAGAAAT
ATCCCTTCCAAATATCTAATATAAAGTTAGATTTCTATTCAAAAATAATAAATAGAAATTGCGTA
GCGTAAGAGAAGAAAATGCCCAAAAGTCCCATGTTTTTCTTGGTTGGAAAAGCCCAACCGGCGAC
TTCCGTCTTCCTGAATTGGGAGAGCAAGAACAAGTCCCTCTTCTTTTTTTGGGGGGGGGCGGAGC
AGTTAAAGAATGAACCAACCCAAATGATTGTTCTAGAATGGCTATTCCTCACAATTGTTCCTTGT
GATGCAGCGGAACCATGGCAATTAGGATTTCAAGACGCAGCAACACCTATGATGCAAGGAATAAT
GGACTTACATCACGATATCTTTTTCTTCCTCATTCTGATTTTGGTTTTCGTATCACGGATCTTGG
TTCGCGCTTTATGGCATTTCCACTATAAAAAAAATCCAATCCCGC
Found at i:391130 original size:18 final size:18
Alignment explanation
Indices: 391109--391153 Score: 65
Period size: 18 Copynumber: 2.5 Consensus size: 18
391099 ATTACAACTC
391109 GAAAAGGAATTAAAAGTA
1 GAAAAGGAATTAAAAGTA
*
391127 GAAATA-GAATTACAAGTA
1 GAAA-AGGAATTAAAAGTA
391145 GAAAAGGAA
1 GAAAAGGAA
391154 AAGCTATTAA
Statistics
Matches: 24, Mismatches: 1, Indels: 4
0.83 0.03 0.14
Matches are distributed among these distances:
17 1 0.04
18 22 0.92
19 1 0.04
ACGTcount: A:0.60, C:0.02, G:0.22, T:0.16
Consensus pattern (18 bp):
GAAAAGGAATTAAAAGTA
Left flanking sequence: Indices 390609 -- 391108
AGGGGAAAAAGCCTTTCCTTGCCTTACCGGACAGTAAGAATTTAATTGCCTTGAAAACAAAACAG
AAGTACTACTTTGGATACGCTATGATTCGCATCTCTCATTAAACTTTTATAATACAATCTATGTC
CTACTCTTTTAGTTTTAGCTTTCTTCATTGAGTAAAAGGAAATTAGCCTTTCAAACAGAAGGCAT
ATGATAGCTCATTCCCGGACTTATTTATATCGTAAGAGAGAGAGAGAACCTCCTATGCCCAAAGA
CTCCCATGCTTTCCGTTGGTCAACAACCAACCACAACTCACTATAATTCTTCACTACTCGTACAG
GAAGGTAAGAAAAACTTGCTTTTCTGGAGGGAATCAAAATGACGTAAATCCCAATTTTATGACCC
AGGAACAGATTTTGCTATTACAAGTAGAAATAGAATTACAACTCGAAAAGGAAAAGCAACTAGAA
AAGGAAAAGCAACTAGAAAAGGAAAAGCTATTAAAATTACAACTC
Right flanking sequence: Indices 391154 -- 391653
AAGCTATTAAAATCGCTTGAGTCGCTGCCTTGTGAAAGAAAACATCATATGTAAGTAAGTAGCAT
CTCGAATAGAAATATCCCTTCCAAATATCTAATATAAAGTTAGATTTCTATTCAAAAATAATAAA
TAGAAATTGCGTAGCGTAAGAGAAGAAAATGCCCAAAAGTCCCATGTTTTTCTTGGTTGGAAAAG
CCCAACCGGCGACTTCCGTCTTCCTGAATTGGGAGAGCAAGAACAAGTCCCTCTTCTTTTTTTGG
GGGGGGGCGGAGCAGTTAAAGAATGAACCAACCCAAATGATTGTTCTAGAATGGCTATTCCTCAC
AATTGTTCCTTGTGATGCAGCGGAACCATGGCAATTAGGATTTCAAGACGCAGCAACACCTATGA
TGCAAGGAATAATGGACTTACATCACGATATCTTTTTCTTCCTCATTCTGATTTTGGTTTTCGTA
TCACGGATCTTGGTTCGCGCTTTATGGCATTTCCACTATAAAAAA
Done.