Specifications
==============

Sequence source file: "/mnt/biodata02/home/xyzhang/pmgdraw-test/test_set/outdir_mt10/NC_016743.2/NC_016743/Repetitive_sequence/123.misa.ini"

Definement of microsatellites (unit size / minimum number of repeats):
(1/10) (2/6) (3/5) (4/5) (5/5) (6/5) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              1
Total size of examined sequences (bp):           380861
Total number of identified SSRs:                 54
Number of SSR containing sequences:              1
Number of sequences containing more than 1 SSR:  1
Number of SSRs present in compound formation:    3


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	49
2	4
3	1

Frequency of identified SSR motifs
----------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	15	total
A	-	-	-	-	-	11	9	1	1		1	23
C	-	-	-	-	-		1					1
T	-	-	-	-	-	12	8	3	2			25
AT	-	3										3
TA	-	1										1
GAA	1											1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	15	total
A/T	-	-	-	-	-	23	17	4	3		1	48
C/G	-	-	-	-	-		1					1
AT/AT	-	4										4
AAG/CTT	1											1