Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_021152
Parameters: 2 7 7 80 10 50 500
Length:  553721

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7731--7760
15
2.0
15
93
0
51
50
6
13
30
1.67
14358--14394
19
1.9
19
94
0
65
37
13
29
18
1.90
14470--14511
21
2.0
21
95
0
75
28
16
9
45
1.79
28086--28131
22
2.1
22
95
0
83
30
17
36
15
1.91
60310--60334
13
1.9
13
100
0
50
4
0
32
64
1.12
67737--67815
39
2.0
39
95
0
140
21
21
29
27
1.99
83806--83858
21
2.6
19
77
16
61
37
22
32
7
1.82
84098--84137
20
2.0
20
90
9
64
7
32
45
15
1.74
87977--88016
18
2.4
17
91
8
64
25
30
20
25
1.99
88477--88517
16
2.6
16
96
0
73
34
24
24
17
1.96
115975--116075
52
1.9
52
100
0
202
23
24
20
30
1.99
123645--123684
18
2.2
19
86
13
57
55
15
25
5
1.60
129760--129789
15
2.0
15
100
0
60
20
20
20
40
1.92
137422--137450
12
2.3
13
94
5
51
20
24
24
31
1.98
163323--163356
17
2.0
17
88
0
50
23
11
23
41
1.87
172477--172513
5
7.4
5
96
0
65
40
16
2
40
1.62
173456--173544
44
2.0
44
95
0
160
21
29
20
29
1.98
174714--174745
16
2.0
16
100
0
64
43
12
0
43
1.42
188598--188623
13
2.0
13
100
0
52
38
15
23
23
1.92
202391--202433
18
2.4
17
77
11
50
32
25
23
18
1.97
218786--218895
36
3.1
36
93
0
166
12
29
12
45
1.79
221727--221761
17
2.1
17
94
0
61
31
5
42
20
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
222669--222709
18
2.3
18
82
0
55
26
17
19
36
1.94
258626--258668
21
2.0
22
90
4
70
32
23
11
32
1.90
270749--270813
26
2.6
25
82
4
78
18
7
4
69
1.31
285940--286051
42
2.6
42
85
1
143
34
15
26
23
1.94
309457--309498
21
2.0
21
90
0
66
47
14
26
11
1.78
324454--324517
3
21.0
3
75
9
58
34
1
4
59
1.28
332567--332594
5
5.6
5
100
0
56
39
0
21
39
1.54
346755--346796
21
2.0
21
95
0
75
45
9
16
28
1.79
346872--346908
19
1.9
19
94
0
65
18
29
13
37
1.90
349918--350006
44
2.0
44
100
0
178
40
30
11
17
1.85
400591--400623
12
2.8
12
90
4
50
9
0
72
18
1.10
437512--437556
22
2.0
22
100
0
90
26
33
22
17
1.96
441119--441161
17
2.5
17
88
0
59
32
16
6
44
1.74
482878--482921
21
2.1
21
91
0
70
29
13
27
29
1.94
491866--491915
25
2.0
26
88
4
75
12
26
26
36
1.91
510201--510239
18
2.2
17
86
4
51
15
30
23
30
1.95
513309--513333
12
2.1
12
100
0
50
20
16
24
40
1.91
526358--526396
13
3.0
13
76
0
51
33
28
12
25
1.93
537507--537546
18
2.2
18
100
0
80
60
5
30
5
1.40
543953--543986
16
2.1
16
94
0
59
44
0
2
52
1.16
543941--543995
14
3.9
15
79
9
53
52
0
1
45
1.11
543964--543997
16
2.1
16
88
0
50
50
0
0
50
1.00

Tables:   1

The End!