Specifications
==============

Sequence source file: "/mnt/biodata02/home/xyzhang/pmgdraw-test/test_set/outdir_mt2/NC_069222.1/NC_069222/Repetitive_sequence/123.misa.ini"

Definement of microsatellites (unit size / minimum number of repeats):
(1/10) (2/6) (3/5) (4/5) (5/5) (6/5) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              1
Total size of examined sequences (bp):           312146
Total number of identified SSRs:                 113
Number of SSR containing sequences:              1
Number of sequences containing more than 1 SSR:  1
Number of SSRs present in compound formation:    19


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	91
2	18
3	4

Frequency of identified SSR motifs
----------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	total
A	-	-	-	-	-	26	9	13	4				2				54
G	-	-	-	-	-	1											1
T	-	-	-	-	-	18	8	6	1	1					1	1	36
AT	-	4	1		1												6
TA	-	7	3	1	1												12
AAT	1																1
ATA	1																1
ATT	1																1
TAA	1																1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	total
A/T	-	-	-	-	-	44	17	19	5	1			2		1	1	90
C/G	-	-	-	-	-	1											1
AT/AT	-	11	4	1	2												18
AAT/ATT	4																4