Specifications
==============

Sequence source file: "/home/xyzhang/pmgdraw/PMGview/media/downloads/20230525043553_66/NC_031323/Repetitive_sequence/123.misa.ini"

Definement of microsatellites (unit size / minimum number of repeats):
(1/10) (2/6) (3/5) (4/5) (5/5) (6/5) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              1
Total size of examined sequences (bp):           658522
Total number of identified SSRs:                 63
Number of SSR containing sequences:              1
Number of sequences containing more than 1 SSR:  1
Number of SSRs present in compound formation:    2


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	50
2	11
3	2

Frequency of identified SSR motifs
----------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	15	16	total
A	-	-	-	-	-	12	5		3	2	1		23
G	-	-	-	-	-	2							2
T	-	-	-	-	-	14	4	3	2		1	1	25
AG	-	3	1										4
AT	-	1	1										2
TA	-	3		2									5
AAT	1												1
TTA	1												1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	15	16	total
A/T	-	-	-	-	-	26	9	3	5	2	2	1	48
C/G	-	-	-	-	-	2							2
AG/CT	-	3	1										4
AT/AT	-	4	1	2									7
AAT/ATT	2												2