Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NC_035075
Parameters: 2 7 7 80 10 50 500
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 500
Length: 644311
ACGTcount: A:0.27, C:0.22, G:0.23, T:0.28
Found at i:22858 original size:42 final size:42
Alignment explanation
Indices: 22799--22887 Score: 178
Period size: 42 Copynumber: 2.1 Consensus size: 42
22789 ACAGTCTTCA
22799 CCAAGACAGCTGGAAGGCATAGAGTCAAGACAAAAAGGAAAG
1 CCAAGACAGCTGGAAGGCATAGAGTCAAGACAAAAAGGAAAG
22841 CCAAGACAGCTGGAAGGCATAGAGTCAAGACAAAAAGGAAAG
1 CCAAGACAGCTGGAAGGCATAGAGTCAAGACAAAAAGGAAAG
22883 CCAAG
1 CCAAG
22888 CCAGGAATGA
Statistics
Matches: 47, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
42 47 1.00
ACGTcount: A:0.47, C:0.18, G:0.28, T:0.07
Consensus pattern (42 bp):
CCAAGACAGCTGGAAGGCATAGAGTCAAGACAAAAAGGAAAG
Left flanking sequence: Indices 22299 -- 22798
CGGTTTTTTCCAAGCAAGATTGTATCAGGAGTAGTAGCAGTAGGAGTGGGAGATTGAAAGCTAGC
TCCTGACTCGAGGGGAGAAGGAATAGTCTATGAAAGAGATAGTCTTAGTACACCCGAAGGAAGAG
GGAAATTTAGGCCTAGTAGCACGGTTGAAGTCCAATCCGTGTGAGTATGAGTGCCAGCCAAGCCG
CTTTCAAGCTCTCCAACGCTAGCAGTGCAGTAAGGGTTCATTCAAAGCGAACCAGTAGCAAAGCG
GTTGAAAGCAGTCTGTCGGTCTAAGTCCTGGTATTCCGGGCAAGCCAGTCGATGGTAGTCATTCC
GGTGCTTCTAGTGACTTTCTTGCCTGTCTCCTGTCTGTTTACGAATCGGATGTGAGGTTTTCCTT
ATATCCTTATATAAAGAGATCTTGCCCTCGGTCTTTCTGCCGCAAAGAAGCAAGCGAAAGAGATA
TTCAATCAACCCAGCAAAGAACCGATACCACTACCACAGTCTTCA
Right flanking sequence: Indices 22888 -- 23387
CCAGGAATGAGAGCGGAAAAGGCGTTAATCAAGAGAATACCCTGTACATGAAAAGGGCTCAGAAT
AGACTCTTTGCTTGAATGGCTTGTTTGCAGGTTTGACATTCTCTTTAGCAAAGAAGAAAGCACTA
CTTCATGGGAAGTTTCCAAAGGTAAGTCCGACGTCTCCTTAAGGTAAGGCAGTTCACTCGTAAGG
CCTCATTCATCTCTTACCCGACAAAGGCCTCTCTCATCCCTTGCTTATGCTGAATCGATATTTTC
TTGGTCTTCTTTGACCCTCGAGTTGAATAAGCTCTTCTTCCTCAAGCTTTTAGCTTGGAACAAGA
ATGGATAGAGTTGACTCAGCTGCGATTGCTCTTGTTCTCTTTGCTCTTTATAAAATGGTTTCTGT
GAACAAGGAAGAGGGGCTGCCATTGAATCAGTTTCATTTGGTTAGAAATATCATAAGAGAAGAAA
GATCGTAGCGTAGAAAAGAAAGAACGTTTTGATTCGCCTTTACGA
Found at i:22869 original size:24 final size:24
Alignment explanation
Indices: 22800--22872 Score: 77
Period size: 24 Copynumber: 3.3 Consensus size: 24
22790 CAGTCTTCAC
22800 CAAGACAGCTGGAAGGCATAGAGT
1 CAAGACAGCTGGAAGGCATAGAGT
** *
22824 CAAGACA---AAAAGG-A-A-AGC
1 CAAGACAGCTGGAAGGCATAGAGT
22842 CAAGACAGCTGGAAGGCATAGAGT
1 CAAGACAGCTGGAAGGCATAGAGT
22866 CAAGACA
1 CAAGACA
22873 AAAAGGAAAG
Statistics
Matches: 37, Mismatches: 6, Indels: 12
0.67 0.11 0.22
Matches are distributed among these distances:
18 9 0.24
19 1 0.03
20 1 0.03
21 8 0.22
22 1 0.03
23 1 0.03
24 16 0.43
ACGTcount: A:0.45, C:0.18, G:0.29, T:0.08
Consensus pattern (24 bp):
CAAGACAGCTGGAAGGCATAGAGT
Left flanking sequence: Indices 22300 -- 22799
GGTTTTTTCCAAGCAAGATTGTATCAGGAGTAGTAGCAGTAGGAGTGGGAGATTGAAAGCTAGCT
CCTGACTCGAGGGGAGAAGGAATAGTCTATGAAAGAGATAGTCTTAGTACACCCGAAGGAAGAGG
GAAATTTAGGCCTAGTAGCACGGTTGAAGTCCAATCCGTGTGAGTATGAGTGCCAGCCAAGCCGC
TTTCAAGCTCTCCAACGCTAGCAGTGCAGTAAGGGTTCATTCAAAGCGAACCAGTAGCAAAGCGG
TTGAAAGCAGTCTGTCGGTCTAAGTCCTGGTATTCCGGGCAAGCCAGTCGATGGTAGTCATTCCG
GTGCTTCTAGTGACTTTCTTGCCTGTCTCCTGTCTGTTTACGAATCGGATGTGAGGTTTTCCTTA
TATCCTTATATAAAGAGATCTTGCCCTCGGTCTTTCTGCCGCAAAGAAGCAAGCGAAAGAGATAT
TCAATCAACCCAGCAAAGAACCGATACCACTACCACAGTCTTCAC
Right flanking sequence: Indices 22873 -- 23372
AAAAGGAAAGCCAAGCCAGGAATGAGAGCGGAAAAGGCGTTAATCAAGAGAATACCCTGTACATG
AAAAGGGCTCAGAATAGACTCTTTGCTTGAATGGCTTGTTTGCAGGTTTGACATTCTCTTTAGCA
AAGAAGAAAGCACTACTTCATGGGAAGTTTCCAAAGGTAAGTCCGACGTCTCCTTAAGGTAAGGC
AGTTCACTCGTAAGGCCTCATTCATCTCTTACCCGACAAAGGCCTCTCTCATCCCTTGCTTATGC
TGAATCGATATTTTCTTGGTCTTCTTTGACCCTCGAGTTGAATAAGCTCTTCTTCCTCAAGCTTT
TAGCTTGGAACAAGAATGGATAGAGTTGACTCAGCTGCGATTGCTCTTGTTCTCTTTGCTCTTTA
TAAAATGGTTTCTGTGAACAAGGAAGAGGGGCTGCCATTGAATCAGTTTCATTTGGTTAGAAATA
TCATAAGAGAAGAAAGATCGTAGCGTAGAAAAGAAAGAACGTTTT
Found at i:101077 original size:13 final size:12
Alignment explanation
Indices: 101044--101080 Score: 51
Period size: 11 Copynumber: 3.2 Consensus size: 12
101034 TATGAAATTC
101044 TTATT-TATATA
1 TTATTATATATA
101055 TTATTA-ATATA
1 TTATTATATATA
101066 TTATATATATATA
1 TTAT-TATATATA
101079 TT
1 TT
101081 TTTTAATAAA
Statistics
Matches: 23, Mismatches: 0, Indels: 4
0.85 0.00 0.15
Matches are distributed among these distances:
11 14 0.61
12 2 0.09
13 7 0.30
ACGTcount: A:0.41, C:0.00, G:0.00, T:0.59
Consensus pattern (12 bp):
TTATTATATATA
Left flanking sequence: Indices 100544 -- 101043
GAAGTTATTAGAGTGTGTTTCGATTTTAGATTTAAGAATTCCACAGTTCAGACAGAGACGTTGTT
GAGTATGTGGCTTGACTTACTCCAGGGTGACTCAAGTCTCGATTGAGCAGTCATTTTTCATAGTC
ACGGGTCCTGCTTTAGCACTGTTTCACATTTGCAACTGTAGAGGGCGGTTTGTGACCTTCCCATT
TTCCAGTGAAACCGGGGACCGAAAGGTCGGTGAGAGATAGCAATAAGATGCATCCATTTCTAGGC
TAATTCAGTGTCTTGTGGATGCTATCTATGAGGTAGTTAGACACGCCCCTTGGGGGATCTGTTGG
GTCTTTTAAAAAGACTCAATCAAAGGGAAGGGCACAAACAAATGAAGGGAAAGCCTGCTGTTTTT
CTGAGGTTGGGTTTTGAGATGAGAGTAAGATACACACGTCGAAGAAATCCGTTGTCTAGAGAGAG
TGGAGTGATCTCAAAGAGTTTTCAATTAGAATATTTATGAAATTC
Right flanking sequence: Indices 101081 -- 101580
TTTTAATAAAGTTTTATTTGATTCGAAAAACTATATTATAGTTTTTCTTGCCCCTTTACTTGATA
CTTTTATTCCCCTTTGATAGCTCTTTTTTGGGAAGGATCGAAGATCGGATATATCGGCTCTATTT
TCCTATCGGACCTGTGAAAGTACTTGCCTAACTGTGAGAACTCGTTAGCCCTTATCAATTATTGT
ACGCCAATACTTGAAAAAGAACTCCCGAAATTTTGAGTTCCACGTCTGCCTTTCACCGGTGTGGG
ATCAAGCCCTTCTACTAGCCCCCCAAGAGCTATATCGGTGGCACTCGGGATCTACGACTTATTTA
GTTACGATAGGACGACTAATCAAAATTAAGCGTCCTTCCCTGGAAAAGCAACTGAACCTGAACCT
TCGCTACGTTCCAGCTAGTCGAACTACCTCAGTGAACCAGAGAAAGCATTTCTATTCAAAGCAAT
CCACCCAAGCCAAGGAAGGCTAGCTAGTCTCTAGGGGCTGAATCT
Found at i:126921 original size:15 final size:15
Alignment explanation
Indices: 126901--126930 Score: 60
Period size: 15 Copynumber: 2.0 Consensus size: 15
126891 CCAGTATATT
126901 ATTTTATTTCACTTA
1 ATTTTATTTCACTTA
126916 ATTTTATTTCACTTA
1 ATTTTATTTCACTTA
126931 GCCTGCCTCC
Statistics
Matches: 15, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
15 15 1.00
ACGTcount: A:0.27, C:0.13, G:0.00, T:0.60
Consensus pattern (15 bp):
ATTTTATTTCACTTA
Left flanking sequence: Indices 126401 -- 126900
TTTTTCATTTGAAATTGAAGTTTGACTCTGATTAGATCCTTAGCGCAAGCGCTAAGTAAGCAAGC
TACCTTATGTAATGTAAAAAAAACCGAGGAAAATAACGTCAAGTAGAAACGAACAAGGTCTTACG
GCACGATCGATCACTATATCTTTTCTTTTTTTTTTTTTTTTTATGGAAAGAGGGGATGATACGTG
GCGTGGTATACCTAATCGTTTGGTCAACGAGACGTACGTAAGTCGACATAGCTCCATGTATATGT
TCTTTGGAGCTAGAACCCATAAATAGAATGAAATAATGGTGAGCCTAGGGCGACGAATATGGCTC
AAGGGTGTCTATACAAAGCCCTTCTCTTATTCATTCAAAGGGCCAATGCACCAGCCAGCCGGTGT
GGTGGCGAACACGCTGTGCTGTAAGCCAAGCTGTTCACCTTGTAGACGGAGGAGATATAGAAAGT
GTGCCGTGCGTGATTCAAAAGATTCTATAGTAGCACCAGTATATT
Right flanking sequence: Indices 126931 -- 127430
GCCTGCCTCCCCCATGACTTTCCGGACCAACCAACCCAGATCTGCCCTCGCAAGTCTCTCTGCAT
TTTGGGAGCAGAGCATGCAAAATCGATCGAGCAATGGATGGATCTTAGAAGAATTCCACTTTGAA
CGGCACGACTCTTTCTATTTTTTCGCTGGAATTCATTTTGTCTCCCCTCCTCTTTCAATCGACAC
ACTCGACGCAGATAGCTCCGGTGGCCCCGGCTTCTGCCTCTATCAGGCGGCGGCAGCCCCCACCT
CCACAGCCACAGCATGGAGGAGCAGCTCCTTAATCCGCACTACAACCAATCCAAATTATCTCCGG
ATCGATATATGATGATGCTAAACCGAGACCGAGATAGAGAAAGAGGGCTGTCCCTTTGTTGGCTT
TTCGAAAAAAAGCACTCATAGGAATGGTGCGAATTCCCATGTTCTTTTTAGTCTCGCTTGGTTTC
GAGAGCCTCCCCCTCCCCGTCTCTTACTCGTCTTTTGAAAGCCGT
Found at i:139769 original size:19 final size:19
Alignment explanation
Indices: 139745--139786 Score: 59
Period size: 19 Copynumber: 2.2 Consensus size: 19
139735 CTTCAGATAT
139745 TTTTATTTCTTTTA-TTTTA
1 TTTTATTT-TTTTACTTTTA
*
139764 TTTTATTTTTTTACTTTTC
1 TTTTATTTTTTTACTTTTA
139783 TTTT
1 TTTT
139787 GGTGCTGCTA
Statistics
Matches: 21, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
18 5 0.24
19 16 0.76
ACGTcount: A:0.12, C:0.07, G:0.00, T:0.81
Consensus pattern (19 bp):
TTTTATTTTTTTACTTTTA
Left flanking sequence: Indices 139245 -- 139744
TGAAGCAGCCTAGCATCACTTTAGATAGAAGCAGAATGGATAACTTACAACTGAAAGTAAGTTCT
TCGGATCGATATCTCGTACGACGTAATGGAGATCTTGGTCTAGATCCGGTGGTTCGCAGAATTCG
GGACCTAACGATGTTCGGTTCGTCCCATGAACGGGAGCGGACAATTCCCTTTTCGGGGAATGGCT
GCAATCACAAGCAAGTGATTGAATGAGTGGGGGGCTCCGAAAGCACATGCGGGATAAGCAGGTAT
TTCAGGAGACGGTCTAAAAATGGGTCCGATTCAAAAAAAAAAAAGAGAACTCTCAACAAGCTGGA
ACTAATCAAGATCAATAGGAAGAGGAGTTAGCTAGGAATCTATTGACAAAGTTCATGCACCTATA
TGGAAGGGCTGTTTTGTTGATGTATTCCTGTCGAGAATGAAGAAGAAGAAAAAGAGCCTTTTCAA
CCGGCCCAGATCTATTATCACGAACCCTAAAATTTCTTCAGATAT
Right flanking sequence: Indices 139787 -- 140286
GGTGCTGCTACTGTTCAACTCCATACTAACATTTTTTAATTCCTATCATCATCGTCGCAGCTTGC
GAGTTTGAGGAAGATAAGGTCGATTCGATGGAGGTGCAGCAAGCCCTCCCCCCGGTGCCGGAAGC
TTCTGAGCCACTACCACTAGCTCAGGAGCCTGTTTCTCCTTCGTTTGAAATCCAAGCTGCTGAAG
TCAACCAAGAGGACATCTGGAGGGAGTTGGAGCAGCAGGAGCAACCGGCACCAACGGGTGGAGCT
AAGCTAACAAGGCCTCACATATGCGAAAGCTCACCCCATTGGAAAATCAGGTAGCTGACCTTATT
ATCGATTTACGAAAATCCGAAGTACCCTCACCTAATAAGATTCAACAAATCGTCGAAATGCTCGA
AGAAGAAAGAATATGGTCTGGAAAAGCTGCGCACAATCAAAAAGCACAACCAACAATATGGCAGA
AAGAGTGTATTTTTTAGGAACTCCAAGGAGTGCTTTAATATGTTC
Found at i:145195 original size:17 final size:18
Alignment explanation
Indices: 145161--145195 Score: 54
Period size: 18 Copynumber: 2.0 Consensus size: 18
145151 CTGTTATGGC
145161 ATTCCCATATGCTTTCTA
1 ATTCCCATATGCTTTCTA
*
145179 ATTCCTATATG-TTTCTA
1 ATTCCCATATGCTTTCTA
145196 TATTTGAGGT
Statistics
Matches: 16, Mismatches: 1, Indels: 1
0.89 0.06 0.06
Matches are distributed among these distances:
17 6 0.38
18 10 0.62
ACGTcount: A:0.23, C:0.23, G:0.06, T:0.49
Consensus pattern (18 bp):
ATTCCCATATGCTTTCTA
Left flanking sequence: Indices 144661 -- 145160
CTCTCTTCGAAAGAGAGTATGCTCTTATTGATGCAGACGATGGAGTAAGGAGAGATTCTTTCAAG
CCGAGAGTTTGGACAGTTGAAAAAGAAAGGGCACCCTCTTTAGAAGAGTTTGATCACCAAAGAGG
TTTTTTCAACTATTCATTGAAAGGGGGAGCTTTACCCGCTAAAGACTTAGAACTCGAGGGGAGAC
GAATGCTAAGATGAAGGCCAGTCTCGGGAATCAGACTCGGGAAGAATAGGATTTTTTTCCTTGGG
ACTTTGCCACCCATAACATAAATAGAAGAGGAAGCTTCTGCCCTTTTTCCTTCTTTTGAGTCTAC
GCACTTTTGCTTAGTATGTTGTTTATATGCTTGTTAATTTAGTTTAATGGATCTTCTCATAGGTA
GCTGCCTGTAATTAGCGACCTTCCTCTTTTTTACAAGCATGAGTAGGACTTCTAGTGTTGGGAAA
GTCATCCTTTCCTTGACATAAGCTCTAGTTTCTCTCTGTTATGGC
Right flanking sequence: Indices 145196 -- 145695
TATTTGAGGTAGTATTCTTCTAGAGAAGGAAGAAAAGCCATCAGCCCAGGGATACTCTGTAGACC
GTTAGACTCGTGCTTCTGTTGGCTGTTGGGAAGTACTTCGTTTCACTTCTCAAAACATAGGAGAG
AAGCCAGTGACCGTAGGAGAGCTTTTTGCCCCTTCCTTGGTTCTTGGTCTATTCCGATGAATAAG
ACCGAATCGAGTGCATATTTATTCCGATTGCTTCCTTCCTTCGTATTCAATTCGTATCTCGAAAA
TCTTTTGTTAAAAGTTACCGATCTTGGCTAACATACGGATACTGAACTTCGTTACGTAACGAGTG
ACAATGGTTCACAGCCCGAGGGCTAATTCAAGTTCCTCTTTCTGTGGAATAACCGGTGCAAGTCT
TTTCTGTTACAGTAAGAGCTGTCGAGAAAATAGAAGATCTGGTCCTATCCGTTGCTGGTGTTGAA
GGAAGTTAATCAGAATAAGCTGTTTTCAAATTCAAATGGGTTGCA
Found at i:204653 original size:17 final size:17
Alignment explanation
Indices: 204631--204666 Score: 54
Period size: 17 Copynumber: 2.1 Consensus size: 17
204621 GGGAAGATAG
204631 AGAAAGAGAGACAAGAA
1 AGAAAGAGAGACAAGAA
* *
204648 AGAAAGAGATACAGGAA
1 AGAAAGAGAGACAAGAA
204665 AG
1 AG
204667 CTAAGGATAT
Statistics
Matches: 17, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
17 17 1.00
ACGTcount: A:0.61, C:0.06, G:0.31, T:0.03
Consensus pattern (17 bp):
AGAAAGAGAGACAAGAA
Left flanking sequence: Indices 204131 -- 204630
TTATCCAGAAACAACTCAATCAATCAATTACCTTATTTAAGATACGCCCAAATCCATTCAACCAG
CCACTCAAGGGTTTGGAGTTACCATTTCCGCTATTCCTGCCAAGGAATAAAGTAAAGGGACTACC
GATACCCCTTCGCGTTCGCTTTGGTTTAGAGTAATCGCTTGTTCCTTCAGTCTTCAGAGGTAAGC
TCTTTTGCCTTCTTCCTAATGGACTACGAGGACCCTAGGATTTAGGACTCTTATAAAGAAGGATT
ATTGGCCTACTGCTGCCTTACCACTAGCTTAACACTAGCAGCACAGGCTTACCTATTAATCACAG
ACCCCCTTCCTTACTTGCTTACTTCCTTGCTTGCCTGGAGAGAAAGAATATTAAAAAGAAAGAAA
GGATCCCCTACTTACTTAGTACAAGGAAGGGAAAGACTTACTAAAAGACCAAAGACTGGCTTACT
TACTGTCTTGGCTCCTAGGACTTCTTACAAGGAATGGGAAGATAG
Right flanking sequence: Indices 204667 -- 205166
CTAAGGATATAACGAAGGGCGAAAGGGAGCACAGAAAGGCGCAATACCAAAGCTTTTTTGAAAGA
GAAGAATGCGCCATAGGTTTCTTCCTGCTTTGCTTTGGGAAGGGGCATTGAAAGAACACAGACAT
AGTGGAAATGCTCCTAGACTAGAGAAGGTTCCCCCGTAAGTCTGATCCTCTCAACTCATACTACA
GCAGGGAAATCCACTTTTCTGGACAGGGTCTTCCTTCTCGGAGAATAGGTCTACTATGCTGAAGC
AGAAGGGAACAGGATGCTCATTTAAATGTCAATGAGACTAGTCAGGATGCTCCCTGTAGTACATT
CCCAGATCTGAGCTACCTGGATCAACCCACCAATTAGTACAGTTCGTCAGTGAGTACGTGGGAAT
AGCCCAGTAATGAATAGAAATTTAAGTCACCGGGTAAAGAAGCGAGGGGATCAGCTCAATTGAAA
GAGAGGGCGCGATCGGCATACAATTATTCGATTTCATTTCTTGCC
Found at i:253758 original size:36 final size:36
Alignment explanation
Indices: 253716--253788 Score: 146
Period size: 36 Copynumber: 2.0 Consensus size: 36
253706 CCTATGTCTT
253716 TCGGAAAAACAAATGCCATGAAGGACTTAGGAAAGA
1 TCGGAAAAACAAATGCCATGAAGGACTTAGGAAAGA
253752 TCGGAAAAACAAATGCCATGAAGGACTTAGGAAAGA
1 TCGGAAAAACAAATGCCATGAAGGACTTAGGAAAGA
253788 T
1 T
253789 TTTCTTGGTA
Statistics
Matches: 37, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
36 37 1.00
ACGTcount: A:0.47, C:0.14, G:0.25, T:0.15
Consensus pattern (36 bp):
TCGGAAAAACAAATGCCATGAAGGACTTAGGAAAGA
Left flanking sequence: Indices 253216 -- 253715
AAAACAGGTACTGATAACAAAGTACAAGCCCTAGCTTTTAAGCCGAAGAAAGAAGCAATCATACT
CCTTAAACAGAAAGATATTGCACTTCAAAATCGTTACTAGAAGCACTACAAGCGCACTTCCTATC
TAAACAAACCAAAGCAGAAAAAGCACCTCCCTCCCGGATAAAGAGCAAGTGTGCGAGAGAATAGA
ACTGAGCATCAAGGCTGCAAGACAGAAGGAAGGTTCCTGCGTGCAGGAAAGCTTTTTCACCGTCC
ATTGGGTATTTGTCTTTATCTCGCTCTCCCAACTAACTCAGACTTATGATAGGCGGGCTCAATTC
CAGATATTGACCTCTGGGGATCCTTCTCTTTGAATTCCCGGTCTTCCGTTTTCTTCCTTGGTTCC
ACCCTTCCATTCATGAAGCAGATCGCCGGGAAGGCTTTTTCTCAAGCATAAAACGAGAGACCCGA
TCACATTGATCGACAAACAAAACTCCCGATAGAAGCCTATGTCTT
Right flanking sequence: Indices 253789 -- 254288
TTTCTTGGTATTCACGCTCATCGGACTGAAGTTGGTCCTCATTTATCTCAGCAGAAGTCTTTCAT
GATCTTTTCATAAAGTTGAATCTAGCCAATGCAAACTCAACTCAGTTAGTACTCCTATATCAATC
GTTGTCGCTGCCTTCTCAAGATGACGGGTAACCCCTTTCTTTAGGAGGATCCATCTCTTTATCGC
AGCATGGTAGGAGCCTTGCATTATTTAAGCATGACAGGGCCGGACATTGCCTTTGCCGTAAGCAT
TTGAAGCCAATTCCTCAATTGCCGCCCAGTACATCGTAAAGTGGATCGATCGATATCTTAAGGGA
ACTTCTCATTATGTCTTTTACCTCTTCTTCTGAGCTAGAGTTACATGCTTATGCTGATTGGGGTC
CTTGTCTTGATAGTCGACGTTCTCTTTCTGGGTATGCTCTCCTTTTTCTTGCCTAATCTCCTTTC
CTAAAACTCTGCGCTTCTCTTTTGAATCTTCTCACCCCGCCTAGC
Found at i:281360 original size:2 final size:2
Alignment explanation
Indices: 281353--281391 Score: 60
Period size: 2 Copynumber: 19.0 Consensus size: 2
281343 ATTAGAAAAG
*
281353 TA TA TA TA CTA TA TA TA TA TA TA TA TA TT TA TA TA TA TA
1 TA TA TA TA -TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
281392 CTAAAAAGGT
Statistics
Matches: 34, Mismatches: 2, Indels: 2
0.89 0.05 0.05
Matches are distributed among these distances:
2 32 0.94
3 2 0.06
ACGTcount: A:0.46, C:0.03, G:0.00, T:0.51
Consensus pattern (2 bp):
TA
Left flanking sequence: Indices 280853 -- 281352
TTTCCGAAAGCGCAGTGCCCCACGGATAGAAGACGACTCCCCTGATTTGGTGTCGCCCATTTTTT
ATATTTATGGGGTTTACACCGTCGTGCACTAATGCTGTTTCTATCTTTTTTTCTAGCAGCATCCG
CTTTTCCAGAACACTAAAAAATGCTGACACCTCGTGGTGTCTCCCGACAAAATGCACTGCTAAGC
GGTCGAACAGTTCCATCCTTCTCGTGTGATCCGGCATCAGGGGTTGCTCGAGAATCGGGACGAGA
ACAGCCTGTGCTATTTCAGGATCCGTCAGGGGCCTCGGGAGCGCGCGGTTGGACCGCTTGATGGA
AATCCGCTGCGCCAGACGGGGAACCACTTCTTACGTCGCACATGGCTATCTCCAGGAGGGGCCCC
TGACTGATTATTCCAACGATAGATAGAATAAGACCCAGAAGTTGGATGGGACTGCCATGAAAGAT
CTCCTCCGGGATTGGATCCCGGTGAAAAGAGATCCATTAGAAAAG
Right flanking sequence: Indices 281392 -- 281891
CTAAAAAGGTGGATTTCGCCCTGCAATCCTAAGGGCCAGGATTCAATCTCCACTGGAGCCATTGT
GAGGAATAACCATTCTAGAACAATCATTTGGTTTGTTTCATTCTTTTTTTGTTCTGCTCCCCCCA
AAAAAAAGGGAGACTTCCTCAGGAAATCGCTGGTTTTTCCAACCCAACCGAGGATTTCCGACAAG
TCCTTCTTCATTTTTAGAGCAAGAAGGGGAACTATAGAGATTCAATGAACAGTGTTTCTTACGAT
TACGCCCAGCCCAAAAAAGCCCTTCGGAGTTGAACCGAAAAAAAAGCCTATTACTTAGGGCCCTT
CAAGAAGTTTGTGTTAAGCATATAGCCGGGCCCTCTTTCTGAGCCAGGATCAAACTCTTCTTTTT
TTACTATGATTGGGCCCTGCAGACGTACTACTTTCAATCAAACCTTTTCTTTCCTTTCCTTAAGA
TATATATGTTACCCACCATATTAATAAGGCACCAAACGCGCACTG
Found at i:290649 original size:14 final size:14
Alignment explanation
Indices: 290630--290660 Score: 53
Period size: 14 Copynumber: 2.2 Consensus size: 14
290620 TATCTAAACT
290630 ATTGGATTAGCGGC
1 ATTGGATTAGCGGC
*
290644 ATTGGATTAGTGGC
1 ATTGGATTAGCGGC
290658 ATT
1 ATT
290661 ATAATTCAAA
Statistics
Matches: 16, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
14 16 1.00
ACGTcount: A:0.23, C:0.10, G:0.32, T:0.35
Consensus pattern (14 bp):
ATTGGATTAGCGGC
Left flanking sequence: Indices 290130 -- 290629
AAGAAAAGCTTTTTCAGATGTTAAAAAAAGCATTGTAGGATAATCGGCATCTGTCCCTCGAGAAA
GAGTAAGATAGGCAAAAAGGCATAGAGACAACAGCGGTAATGCCGCATCTCTCGATGAGAAGGAA
TCCTGGAAAGAAGAGCAAAGAAAAGCCCTTCTTCTTCTGCCTTTTGACTCTATCTTGCCCTTTCT
TTAGGGAATTGCGGAGTGAATGAGTGCAACAAAACAAGGAAAGAAGGCTATAAGCTGCCTACATG
GAATTACTCTTCATGCACATTTCCCAGAAAGAGTATATTGCGATAATCGGATGCTAAGTCTCCCT
GGCTTCCTTCCTCCAGCGGATCTGTGGGCATTAAAAGAAGAAAGACTTTCAGGTTCTTCGCCACA
TTCCTTCTTAGGAAAGAAAGGCTCCCGTTCGTGCCCTGTAAGAAGGAAAATTAGAAAGGAAGGCA
TAGTCGAAAAGACTAGCAGCTTCTCTGTGCATGGATATCTAAACT
Right flanking sequence: Indices 290661 -- 291160
ATAATTCAAAAAGACTTTCGCGAAGCAGGAAAACAATCAGGTAATCAGGAAAGGCAGAAAGGGTA
GAGCCTTAGTTACCCGCAGCTCAAATAGCCAAGGTCGGTGGAAAAGGAATAGTACAGCTTGTTTG
GATAAAGGAAGCATTCATACTCGACCCGCGTCTGGACGCCCCTCTCGGGCTCACTTCCTGACAAC
CCAGCCCACAACAGGAAATGGACAGGCATTGACAAAAGCCGAAGCCTCTAACGATTTTTAAGCTG
GGTAACGGGTACCCTATCGGAAAGGGGTTTTCGTCTACCTCCCAAGCATATGGCGGGCTTATAGG
GCGCTGGTCTCCGTTAGGCTTTGAGTCTAGGAGTATAGCGATGGCTTCATCCACCGGTCCTACCA
TGGAACGAGTTTCTTCGCGCTTGGCCTTGAAATTTCGAGGCATCTTTCCCAAGACAAGAAGCGGC
GTCGGATCCCGGTAGTGCGGTAGTACGCCCAGCAGAATGTCGTAG
Found at i:299205 original size:26 final size:26
Alignment explanation
Indices: 299176--299228 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
299166 GACACGCTAT
299176 GATCGCCGTCAAAGACAGGATTCGAG
1 GATCGCCGTCAAAGACAGGATTCGAG
299202 GATCGCCGTCAAAGACAGGATTCGAG
1 GATCGCCGTCAAAGACAGGATTCGAG
299228 G
1 G
299229 CCTTTGTCCC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.30, C:0.23, G:0.32, T:0.15
Consensus pattern (26 bp):
GATCGCCGTCAAAGACAGGATTCGAG
Left flanking sequence: Indices 298676 -- 299175
GTGGTAGTGGCTCTATTGACTATAGCCGTCCCAATGTGAAATATAGTATTCAGTAGACGCAAATG
CAGATACTATCCCCTACGGAATAAAACTTTCTTTCATTCCGTAGGGGTAAGACTCTTCAAATAAA
ACTAAAAATTCACCTAGGACTTTTTTCTTTTATAGGGACTTCTGGCTCTGATCCTTCTATAGTAG
GAAGACAAGATCGCAAGGGAATCACTAGTTCGAGTTCCATGCCTTCCTTCTGGTCCCAAACACTG
GGTTATTAACCGATGAGTTCATTTTCCCCTTACCCATTTCTTGTCCATGTGTCCCTTGCTTCTTA
GTGCTCCGTTGGACGGGGACTCCTTCTTCATTTGAATGCTTTGATGCTGGCCAACTGGGAGTAGG
TTCTGGCTGCTCTTTCTGTGATGCTATTTCGACCTCGTAAAGATATTAGGACTTTCACACTGACA
TTGAGACAGAAAACATTCGATCAGTTTCCCAGCGTGACACGCTAT
Right flanking sequence: Indices 299229 -- 299728
CCTTTGTCCCCATTGCTTGTTAGTTAAGTAGGGAGAGAGAACGCCCCATCTCTTGATTACGAAGA
TCACTTTCACAGCAAGCACGAAGCTTAACTATTATGTAAATTGAAACGATCTCCCCAGGAAAGCA
TGATGCCTGACTTGCCCCTGCTTTCCAAAACGGTAGACCAAAAGCACTGAAATGAATATGAGAAA
TGTGGCCTATCTATGGAAGGAATCTTTCGTTACTAGAACCCCTTCCTAGTGACTGTAAGCGAAAT
GCATTTAGCGAACGCCTGGGGGTACTGAGTTCCATATTTTTTATTATAGAAATGTTATCTCTATC
TAAACGACTAAGTCTTCCAGTGATCTCTCCCCCACCCAAAACCATCCCTTCCAGCGTTAGCGCAC
AAGAAGGAGCTTTTGGCAGTGAGTCGAAAGTCTTAGTGAGAAGCCCTCTTAGGACTCTTTCCACT
CTTCTCTGAGTGCCTTCAACAGTGCTTAGGTAGCGCTCACTGCGA
Found at i:326293 original size:17 final size:17
Alignment explanation
Indices: 326250--326295 Score: 58
Period size: 16 Copynumber: 2.8 Consensus size: 17
326240 GCAGTAAATG
*
326250 GAATAAACTAAGCAAGA
1 GAATAAACTAACCAAGA
*
326267 G-ATCAACTAACCAAGA
1 GAATAAACTAACCAAGA
*
326283 GAATGAACTAACC
1 GAATAAACTAACC
326296 CCAAGGGATG
Statistics
Matches: 25, Mismatches: 3, Indels: 2
0.83 0.10 0.07
Matches are distributed among these distances:
16 14 0.56
17 11 0.44
ACGTcount: A:0.52, C:0.20, G:0.15, T:0.13
Consensus pattern (17 bp):
GAATAAACTAACCAAGA
Left flanking sequence: Indices 325750 -- 326249
TAAGCAGCCAAGGCCAAGAGCAAGCAGGAGTAGTCCTATCTGCCTATAAGGATTCGATAAAGAAA
GAGAATGTGAGTGGGCAGGAGATCAATAAACACAGAAAGCGAAGAGCAAAAGGAGCAGAAGACAC
TCAGTTGTTTATGTGAAATCAAGGAGCAGCAGGTTACACTTTTACACTTTCCCAAAGCAAAGAGA
GCTCAAAGCAATAAGATGAAAGCTGGGATGAGATGCTAGCCTTAGCTAGGAAGATCCATCATTGA
GCCTTAGGCCACTACCGAGCAGAAATGGAGGATCATAACACTTGAGAGATGATCCCTACTTGAAA
AGGCGGAGACAATACCTCTTGTTGCGACAAATCGAGTTTCAAAAGCCCATTTATCAATCACATTT
TCAGGCACACCAGTCAAAGAGCCATCGGACCCATTAAAGTCCCCTTTTTTACTAATATACAAGGC
CTTTGCCAGGATGTCTTTCATCAAGCAAAAGAGGGGCAGTAAATG
Right flanking sequence: Indices 326296 -- 326795
CCAAGGGATGATCTCGGATTGAAATCCAAGGCATGGTCCCATTGAAAGCCCAGGGATAAATTCCT
AAAACAGAAAAAAAAAGTAAAGTCCAAGGGGGTATGATCCCAATAAAGATAGGATGGATTTTAAG
TCATTTTGGACGAAGCAGCGGGCATACCAGAAATGGCTTGTCAGGAATGGTAGATGGAGCAAGAA
TGCATAGCAGGCTTAAAACACGACACAAGTAGGACGCACTGAGGCCGAGCTTTCCTCTACTACTC
ATTGGAGCTAGCATACGAAATTATCCGTTGAAGGGTTCAACTCTCAGGGCGGCCATTGCGAGCGA
TATTCACTTTCAAGAATCATCGAGCCTACGCCTATTTCATTACTCTCGAAGAGCTCATCAAAGAG
CTAAGGCTAAGGGATGAGAAAAAAAAAGGAGGAGGTGGAATTTCTTTCAACTATAACATTTATTA
CAACACTTAATATTACAGACAGAGAATTCGGTAAGGGGATAGAAG
Found at i:397438 original size:15 final size:14
Alignment explanation
Indices: 397418--397472 Score: 74
Period size: 15 Copynumber: 3.7 Consensus size: 14
397408 TCATTAGAAG
397418 AACCAGCGGTAGCTA
1 AACCAGCGGTAGC-A
*
397433 AACCAGCGATAGCAA
1 AACCAGCGGTAGC-A
397448 AACCAGCGGTAGCA
1 AACCAGCGGTAGCA
397462 GAACCAGCGGT
1 -AACCAGCGGT
397473 TTTTGGCCAA
Statistics
Matches: 36, Mismatches: 3, Indels: 2
0.88 0.07 0.05
Matches are distributed among these distances:
14 1 0.03
15 35 0.97
ACGTcount: A:0.36, C:0.27, G:0.27, T:0.09
Consensus pattern (14 bp):
AACCAGCGGTAGCA
Left flanking sequence: Indices 396918 -- 397417
TAAAAAGCTTAAAAAATGTATCCCATTTCTTTGAAATCCCACTATAGTAATGCCAATAAAAAGAG
AAAATGAGAGACCCAAAGTAATGAGAAAATGACTTGTAACTGTGAAGCTATAAGGTATCATACCC
TGGGGATTACGAAATAACGAAAAAGTAAAAGTGACCGAGATGCAAGGGAAATACTTTTGTTTCAC
ATTACTGGAAAGACCGCCTATTTGTTCGTTTACCGGGTTCAGCACGAAATCATAAATAAGCTCTA
CCAAGGATTGCCAAGCATTTGGTACTAACTTTCCTCCTCCCTTTTTAGTAACAAAATGAACCAGA
AGTAGGAACAAACTGAGAGTTAGCAGCATAAACAAAGATGGATTTGTGAATGAGAAATACAAGTT
TCCAATCTTCAAATCAATCAATGGCACAATCTCAAATTGCTCAAGGGGGCTGGGGACGATGGGTG
GTTGGGGTGGTTCCATTTGCCCCCCCACCCCCAGGTCATTAGAAG
Right flanking sequence: Indices 397473 -- 397972
TTTTGGCCAAGGCCAAGACAAACATTTTGAAAAAAAATCTTTTGAATTTTGAATAGCCGTGGAAA
ACAATTTCATTTTTCTTTCATTCTTTTCATTCTCCGCTCCCCCCAAAAAAAGGAGAGACTTCATT
TTCACTGTACGAGTAGTGAAAAACTATAGTTTACTTTTATTGGTTGTTGACCAACGGAAAGCATG
GGAGTCTTTGGGCATTTCTTCTTCTCTTACGATATTTCTAATTACCTAATAGAATAAATACTTTA
GTTCGAACTAGTTTTTAGCTTGAACGTGGCGAATGCTATCTCTTTCCCGCAACTCGACTGTTTAA
CAGGATGGTACGAATCCGCTCTTTGACTTAGTTAAGGAAGGAAGCAATTGTTCTCTTTGCGTTTA
GCTGGGCAAAGCAAAGTGAAGGGAAGGATGAATCGCTCCCGAAAAGGAATCTATTGATTCTCTCC
CAATTGGTTGGACCGTAGGTGCGATGATTTACTTCACGGGCGAGG
Found at i:487188 original size:24 final size:24
Alignment explanation
Indices: 487146--487194 Score: 62
Period size: 24 Copynumber: 2.0 Consensus size: 24
487136 ATTCGGATTC
* *
487146 GTTACTTGGGGCTGATGAGGATGA
1 GTTACTTCGGGCTCATGAGGATGA
* *
487170 GTTACTTCGGGCTCCTGAGGGTGA
1 GTTACTTCGGGCTCATGAGGATGA
487194 G
1 G
487195 GAATCCGTTG
Statistics
Matches: 21, Mismatches: 4, Indels: 0
0.84 0.16 0.00
Matches are distributed among these distances:
24 21 1.00
ACGTcount: A:0.16, C:0.14, G:0.41, T:0.29
Consensus pattern (24 bp):
GTTACTTCGGGCTCATGAGGATGA
Left flanking sequence: Indices 486646 -- 487145
CAAAAAGTTTAAATTGTCAGTTTCATCCTCTTTATGAGCCTGAGATCATAATCATATGGGTCAAC
AATTCTCATTTCTTAGTTACAGAAAGCCCTTCTCAAGGAAGTAAGCCAAAAGCCACTCATCTGAG
CCAGCGGATTCTCATTCTGCTGTGCCGGTGCGCAAAGCAAGCACGCTTAGACTGCGATGTGCAAT
CTTTGGTCTGCCTATCATTGTCCATTAAGGGCTGACTCCGCTAGGCAAGAGGACCACTACTGGGA
TTATTCAACTACTAACTGATGACCAGGGGACTACTCTGCTTCTTCCACTACTGATATTGACCGAC
CTGTTGAGAGGATAGCAACAGGAGAAAGAAAAAAAAGAAGTAGAGTTAGGTTCTGTTCTAGTATG
TAAGCATCTCTTTCCTCGGTCGATTCGTCTGCTCATTCAGCGTATGATTCTTATCCTACTTCCGA
TAAGTCTTATGAAACGAATTCGGCTGGAGATAGGCATTCGGATTC
Right flanking sequence: Indices 487195 -- 487694
GAATCCGTTGTTTCGGGATAAACTTGATATGTTAGTTCGGCCTCGGCTTCTTAGGATGATGCCTG
TGCAATGTATGATCCATCGGATTCTTTTTATTCTATTCTCGGTGCGTTGTTCTTCAGCGAATGAA
AGAAACCGCTGATTCCAAAGTTCCTTCATCAGATTTGGGTGCTTTTGAAAGAGCTGCTTCTGCGA
ATGACTCAACTGATACTACTCAAAAATTTCCCACATGGAAGGAAATGGGATTTTTGAGAAAAGGG
GTTGGGAACCATCGAAGGACTAGCAACCTGACAGTCCTAAGCAACCTTGAACCAACAACGTTACA
TATACCATACTGCTATAGAAGACATGAGTACCAGTTAGACTACGGGACGCGTACACCCGAAATTG
GTGAGCTACTTACTGCCCCTTAAGTCAAGAGAATAATAGTACTTTCAGCAAAGGATATCGTAACT
ATGGCGAATACGTTTTTCTTGCTTTCCACATACCCGGAATGCGAA
Found at i:504561 original size:26 final size:26
Alignment explanation
Indices: 504527--504584 Score: 91
Period size: 26 Copynumber: 2.3 Consensus size: 26
504517 TTCCATACTT
* *
504527 AGAGAAAGATTTTAAGTTAAGAGAAG
1 AGAGAAAGATTTTAAGTCAAGAAAAG
504553 AGAGAAAGATTTTAAGTCAAGAAAAG
1 AGAGAAAGATTTTAAGTCAAGAAAAG
504579 A-AGAAA
1 AGAGAAA
504585 ACTGCCTTTT
Statistics
Matches: 30, Mismatches: 2, Indels: 1
0.91 0.06 0.03
Matches are distributed among these distances:
25 5 0.17
26 25 0.83
ACGTcount: A:0.55, C:0.02, G:0.24, T:0.19
Consensus pattern (26 bp):
AGAGAAAGATTTTAAGTCAAGAAAAG
Left flanking sequence: Indices 504027 -- 504526
GCCAATTAGTCTATCCGTCCCTTTTGCTAGAGTAAGTAATTCCCTTCCCTTTTGTTTGCCAGCGT
AGCGCATTGATCATTGAAGTGGGGGCTAGGCGAGGGCATGGTCTACTTTTTGTTCTGAAATGACT
AAGTACGGCTTGGCTTCAGCTCGTGGGACTGGTTCTCTAGAAAAAGTCCCAAACCCCACATCCTG
CAGTCCGCCTGGATTCGATTCGCTTTTAGTAATTATATTACATTATATATATAAGTAATTAGAAG
CTAAAGAGAAATTCAATATTACCATATTCTACCGCTCAACTAACGCTATGTGATCCGGTCAAGAT
GAATCGATCGAATTTCACAGCTGAGGAGGCAAAGCGAGAGGTTCTGAAAGAAAAGACTTTATAGA
ACCTTACTCACACGATACGGGGATGGGCCTACACAAGCAGAAGGAAGAGCTATTAGCTTGTCGGC
GTAACGAATGAACTATCGGATGGTAGGCTAACTGCTTCCATACTT
Right flanking sequence: Indices 504585 -- 505084
ACTGCCTTTTTTTTGAATTGAAGGAGGAGTCGCGCATTCGTCTGCAGCGTATAGTATAGTAGCTT
CAATGGAAATCCGTTTGAATTGATGATTTTTCACCTGATTCCCCCAAAACCGTAGAAGCTCAGAT
CGGGGTTTAGCGATAACCTGAGATCCTTTATTCTGTCTCCACTTCTGAGCCGACCGAGCCTGAAG
CCAATATGTATGAAAGAAACCAATCAACGCAGGAATGGAGTTCGTAGCGAGAAGATAAAGTTCCT
CGCCTGAGAAGCACTTCACTGGGTAATAAAAAAAGCTACCTAAAAGATCTTATTACCTTTACTCT
AAGATGCTATAAGATAATTGGGAATCTTTTAGCCGCTATTCCCGCACTATTGTAAACCAGCTTGA
TAAAGGGTAGTGGTAGAGTCTCAGTACCACTGAAAGTGCGATAGTCGGGCAAACAATCTCCTCTT
TTTATCATATCATATAAGGTAGGGTATTGTATATATGGAAATTCA
Found at i:572900 original size:21 final size:21
Alignment explanation
Indices: 572874--572920 Score: 94
Period size: 21 Copynumber: 2.2 Consensus size: 21
572864 TTAAGGGATG
572874 TAACAGAAGTTTCAAGAGAAC
1 TAACAGAAGTTTCAAGAGAAC
572895 TAACAGAAGTTTCAAGAGAAC
1 TAACAGAAGTTTCAAGAGAAC
572916 TAACA
1 TAACA
572921 ATCGATGGAC
Statistics
Matches: 26, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
21 26 1.00
ACGTcount: A:0.49, C:0.15, G:0.17, T:0.19
Consensus pattern (21 bp):
TAACAGAAGTTTCAAGAGAAC
Left flanking sequence: Indices 572374 -- 572873
TTAAGACTGTTGCAATTGGTACAACTGCTTCAATGGGATAGAAGGAAACTGGCTAAAAAGGATTA
GAAATGGACTAGTAAGAGACTCCAATGTAACCTCAAACTAAAATTGGAACCCTAGGAGGGGCAAC
TTCCACTCTTTTTTTCACTCTTTCCATTGTCGTTTACTTTACGAAGCGAAGGAAATCAAAAGGTA
TGCCCATTTTATCGAGGAGAGGAATTACTAGCTCGCAGGCTTAAAAATGATAACTTCCTTCCTTG
CCCTCGAACCGACTATCCAACGGCATGGAACACTTAGCATTGGCCTATAACTCAAATTCCATTTT
ATAGCACGCCAACAGGAGGGGCTTCTTACAAAAGCACTCCAACAACTCGCTTGAACTTGAAGAGA
GAAGCAACTACTACTTCTCCATCAAAGGAAAAACAAGCATCGACTAAATAGAAGGCCCTTGAATC
TTATCGTTAGAGCGCTATCTACCCTTAAGACTTACTTAAGGGATG
Right flanking sequence: Indices 572921 -- 573420
ATCGATGGACTGGAAGGGCGAGAGACAGAACAGCAAAGAGAACTCAATCTAGAATTTCCACTCCT
TCTAAAACCCCAACCCCAAGTACGGCATTAGCAATTGAAGAGCTTAGTTAGGATGGGTGGAACTA
CAACCCCTCGAACAGGCTCGATAAAGTCTGGGAGATTAGATAAGCTGGCTAGGTATTTTTATATT
CTTTTTACTGAAAATGCACCGAAGGCAACTGCCATTGAAACTATATAGCTTTATATATAAAAGGG
AGAATTCCGCTCGAAAACCAGCCCTCTTCACACCAGTACCTCTGTCCCGACATTTGGTGAGATAG
GGGTAATGCCTACCAAAGGTAAAGGGGAGCCTTCATGCAAATCTATTGAAGGGTCACCTACGTTA
GCTGGTGCCCACAGTGCCAAAGTTTCAACCAAGATCCTTTGGCTCCGTGCTGGTAGCCGGCTTGT
TACTCCAGATTTTAGTGACAAGAACGTCTGTCACGTGCGTCCCTA
Done.