Specifications
==============

Sequence source file: "/mnt/biodata02/home/xyzhang/pmgdraw-test/test_set/outdir_mt1/NC_062833.1/NC_062833/Repetitive_sequence/123.misa.ini"

Definement of microsatellites (unit size / minimum number of repeats):
(1/10) (2/6) (3/5) (4/5) (5/5) (6/5) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              1
Total size of examined sequences (bp):           351183
Total number of identified SSRs:                 39
Number of SSR containing sequences:              1
Number of sequences containing more than 1 SSR:  1
Number of SSRs present in compound formation:    1


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	32
2	3
3	4

Frequency of identified SSR motifs
----------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	total
A	-	-	-	-	-	6	4	1			11
C	-	-	-	-	-	1		2			3
G	-	-	-	-	-	1	1				2
T	-	-	-	-	-	9	2	1	2	2	16
AG	-	1									1
AT	-		1								1
TA	-		1								1
AAG	1										1
AGA		1									1
CTT	1										1
TAC	1										1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	total
A/T	-	-	-	-	-	15	6	2	2	2	27
C/G	-	-	-	-	-	2	1	2			5
AG/CT	-	1									1
AT/AT	-		2								2
AAG/CTT	2	1									3
ACT/AGT	1										1