Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_050960
Parameters: 2 7 7 80 10 50 500
Length:  504715

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19802--19832
13
2.4
13
94
0
53
38
29
3
29
1.73
37166--37207
20
2.2
19
87
12
59
30
19
0
50
1.48
58481--58552
34
2.2
33
85
7
94
18
22
43
16
1.88
88759--88789
11
2.8
11
95
0
53
22
41
9
25
1.84
103056--103093
16
2.4
16
91
4
60
39
13
36
10
1.79
105112--105169
16
3.8
16
72
19
52
20
17
27
34
1.95
138016--138063
24
2.0
24
83
0
60
20
14
31
33
1.93
163012--163086
21
3.6
21
92
0
114
45
24
10
20
1.82
190457--190517
21
2.9
21
95
0
104
47
1
26
24
1.61
208072--208113
17
2.5
17
92
3
68
59
0
0
40
0.97
208770--208848
39
2.0
39
95
0
140
22
27
17
31
1.97
225294--225330
15
2.4
16
90
4
58
21
29
13
35
1.92
240920--240985
23
2.9
23
97
0
123
18
39
4
37
1.71
253390--253425
19
1.9
18
88
5
54
41
8
16
33
1.78
262050--262117
18
3.8
18
90
0
109
13
26
22
38
1.91
262050--262110
9
6.8
9
69
0
50
13
27
21
37
1.90
262094--262173
27
3.0
26
76
20
83
11
21
26
41
1.86
262593--262634
22
1.9
22
90
0
66
35
26
7
30
1.83
311553--311595
18
2.4
18
81
18
54
18
20
25
34
1.96
314431--314469
17
2.3
17
100
0
78
23
28
17
30
1.97
400066--400131
30
2.2
30
86
8
89
27
13
34
24
1.93
414090--414233
63
2.3
63
98
1
281
35
22
22
19
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
428167--428212
22
2.1
22
100
0
92
13
36
19
30
1.90
503950--503991
22
1.9
22
90
0
66
30
7
26
35
1.83
504411--504490
27
2.9
27
78
16
85
41
26
21
11
1.86
504467--504534
18
3.8
18
86
7
93
38
22
26
13
1.91
504456--504530
9
8.3
9
69
0
51
38
24
24
13
1.91

Tables:   1

The End!