Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_054215
Parameters: 2 7 7 80 10 50 500
Length:  144129

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12590--12621
16
2.0
16
93
0
55
37
21
12
28
1.90
12955--13019
21
3.1
22
84
8
91
23
23
12
41
1.87
16432--16489
10
5.8
10
91
0
80
44
5
1
48
1.35
16432--16489
16
3.6
16
92
0
80
44
5
1
48
1.35
16432--16489
6
9.7
6
92
0
80
44
5
1
48
1.35
16649--16696
20
2.4
20
89
0
78
45
8
25
20
1.79
38210--38251
20
2.2
20
87
8
61
52
2
2
42
1.27
39207--39249
18
2.4
18
100
0
86
39
18
30
11
1.86
50034--50137
53
2.0
53
86
0
145
28
20
36
14
1.92
58397--58452
27
2.1
27
86
0
76
46
14
12
26
1.80
61819--61869
20
2.5
20
93
0
84
23
13
23
39
1.91
79900--79928
15
1.9
15
100
0
58
27
20
24
27
1.99
80003--80065
21
3.0
21
97
0
117
39
9
22
28
1.85
81509--81600
2
46.0
2
86
0
130
47
2
4
45
1.34
95298--95322
12
2.1
12
100
0
50
32
8
44
16
1.76
95784--95827
21
2.0
22
83
12
56
54
25
11
9
1.65
95785--95827
22
2.0
22
81
9
52
55
25
9
9
1.61
108674--108729
24
2.3
24
84
6
69
32
10
7
50
1.64
119816--119843
11
2.5
11
100
0
56
35
17
10
35
1.85
130707--130759
22
2.4
22
96
0
97
28
18
20
32
1.97
130719--130765
22
2.1
22
92
0
76
31
14
23
29
1.95

Tables:   1

The End!