Specifications
==============

Sequence source file: "/mnt/biodata02/home/xyzhang/pmgdraw-test/test_set/outdir_mt2/NC_025931.1/NC_025931/Repetitive_sequence/123.misa.ini"

Definement of microsatellites (unit size / minimum number of repeats):
(1/10) (2/6) (3/5) (4/5) (5/5) (6/5) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              1
Total size of examined sequences (bp):           106809
Total number of identified SSRs:                 79
Number of SSR containing sequences:              1
Number of sequences containing more than 1 SSR:  1
Number of SSRs present in compound formation:    12


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	55
2	23
3	1

Frequency of identified SSR motifs
----------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	total
A	-	-	-	-	-	16	3	1			20
G	-	-	-	-	-			1	2		3
T	-	-	-	-	-	20	5	2	4	1	32
AT	-	10	4	4	2						20
TA	-	1	1					1			3
ACT		1									1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	total
A/T	-	-	-	-	-	36	8	3	4	1	52
C/G	-	-	-	-	-			1	2		3
AT/AT	-	11	5	4	2			1			23
ACT/AGT		1									1