Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_057143
Parameters: 2 7 7 80 10 50 500
Length:  538434

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50526--50615
36
2.5
36
88
0
135
26
26
3
43
1.70
52693--52723
12
2.6
12
100
0
62
6
35
0
58
1.24
56797--56821
13
1.9
13
100
0
50
40
32
12
16
1.84
110739--110781
18
2.4
18
81
18
54
18
20
25
34
1.96
124597--124632
18
2.0
18
94
0
63
38
16
13
30
1.88
156053--156101
22
2.2
23
85
10
66
20
14
44
20
1.86
170420--170458
4
9.8
4
100
0
78
25
0
0
74
0.82
175655--175691
13
2.9
13
96
4
67
62
0
0
37
0.96
185015--185044
15
2.0
15
100
0
60
26
0
26
46
1.53
206832--206879
15
3.1
15
88
5
69
50
18
22
8
1.74
206831--206879
16
3.1
16
88
5
73
51
18
22
8
1.72
226499--226546
25
2.0
24
87
4
69
18
12
27
41
1.86
236046--236092
15
2.9
16
87
6
60
10
6
0
82
0.82
236588--236625
18
2.1
18
95
0
67
23
7
5
63
1.42
259973--260015
10
4.5
10
85
11
63
58
0
6
34
1.25
272169--272205
18
2.1
18
100
0
74
43
5
21
29
1.75
286005--286047
18
2.6
16
82
10
52
25
32
20
20
1.97
329776--329825
18
2.8
18
96
0
91
36
20
32
12
1.89
345153--345217
32
2.0
32
96
0
121
27
27
27
16
1.97
418386--418435
24
2.1
24
96
0
91
12
22
34
32
1.90
431213--431248
18
2.0
18
94
0
63
30
33
2
33
1.72
489875--489912
18
2.1
19
90
5
60
52
21
23
2
1.59
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
493341--493374
8
4.2
8
92
0
50
47
0
11
41
1.40
505014--505044
14
2.2
14
94
0
53
58
3
0
38
1.15
529029--529076
25
2.0
24
87
4
69
18
12
27
41
1.86

Tables:   1

The End!