Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_024624
Parameters: 2 7 7 80 10 50 500
Length:  511530

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
131575--131602
7
4.0
7
100
0
56
42
14
14
28
1.84
138751--138786
18
2.0
18
100
0
72
33
27
22
16
1.95
146717--146773
28
2.0
28
100
0
114
35
14
31
19
1.91
153371--153408
20
1.9
20
84
10
51
39
0
2
57
1.12
155098--155154
28
2.1
26
84
12
71
50
19
12
17
1.77
158740--158775
18
2.0
18
100
0
72
27
0
5
66
1.13
211585--211684
27
3.7
27
83
1
137
23
21
33
23
1.98
211575--211683
54
2.0
55
96
1
202
26
19
32
22
1.97
225094--225159
26
2.5
26
100
0
132
12
24
21
42
1.86
225356--225432
27
2.9
27
92
0
127
27
16
20
35
1.95
241743--241783
16
2.6
16
92
0
64
78
9
4
7
1.10
262082--262181
27
3.7
27
83
1
137
23
21
33
23
1.98
262072--262180
54
2.0
55
96
1
202
26
19
32
22
1.97
284015--284121
33
3.3
33
67
12
103
31
13
40
14
1.85
284012--284156
65
2.2
65
98
1
281
31
14
40
13
1.84
284036--284138
31
3.2
31
66
12
91
33
15
38
12
1.85
284050--284153
32
3.2
32
66
12
95
31
15
41
11
1.83
313167--313197
13
2.4
13
100
0
62
35
19
19
25
1.95
336019--336090
21
3.4
21
100
0
144
19
9
23
47
1.79
338205--338242
19
2.0
19
89
0
58
39
18
13
28
1.88
361193--361281
33
2.7
33
98
0
169
37
10
25
26
1.88
384282--384321
21
1.9
21
100
0
80
37
20
10
32
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
385519--385632
57
2.0
57
100
0
228
22
24
38
14
1.91
392224--392280
28
2.0
28
100
0
114
35
14
31
19
1.91
394166--394193
14
2.0
14
100
0
56
28
0
28
42
1.56
416157--416197
20
2.1
19
95
4
73
19
14
17
48
1.81
451998--452042
14
3.1
14
93
6
81
22
13
0
64
1.28
451996--452040
15
3.1
15
93
6
83
24
13
0
62
1.31
452953--453020
33
2.1
33
100
0
136
26
23
8
41
1.83
453722--453746
12
2.1
12
100
0
50
32
0
24
44
1.54
470692--470752
17
3.0
20
73
26
65
47
11
1
39
1.50
470716--470750
9
4.0
9
92
7
63
45
11
0
42
1.40
470717--470750
17
2.0
17
100
0
68
47
11
0
41
1.40
482287--482326
21
1.9
21
94
0
71
25
30
25
20
1.99
497949--497995
24
2.0
24
86
0
67
23
27
21
27
1.99
508468--508509
21
2.0
21
100
0
84
38
19
28
14
1.90
508490--508567
29
2.7
29
97
0
147
29
23
33
14
1.93
510835--510937
21
4.9
21
96
0
179
33
20
30
15
1.94

Tables:   1

The End!