Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NC_035977
Parameters: 2 7 7 80 10 50 500
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 500
Length: 163057
ACGTcount: A:0.27, C:0.23, G:0.23, T:0.28
Found at i:12814 original size:21 final size:21
Alignment explanation
Indices: 12787--12870 Score: 123
Period size: 21 Copynumber: 4.0 Consensus size: 21
12777 CCCTTGCCTT
* * *
12787 AATCTCTTGATTTATAGATTT
1 AATCTCTCGATTTATGGATTC
* *
12808 ACTCTCTCGACTTATGGATTC
1 AATCTCTCGATTTATGGATTC
12829 AATCTCTCGATTTATGGATTC
1 AATCTCTCGATTTATGGATTC
12850 AATCTCTCGATTTATGGATTC
1 AATCTCTCGATTTATGGATTC
12871 GTCGTATATG
Statistics
Matches: 56, Mismatches: 7, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
21 56 1.00
ACGTcount: A:0.24, C:0.19, G:0.13, T:0.44
Consensus pattern (21 bp):
AATCTCTCGATTTATGGATTC
Left flanking sequence: Indices 12287 -- 12786
AACTTACGAGGTTTCAGATACATTATCTGAAACCTTGTAGGCAAAAGGGGTAAGACTGGAAGCGG
AAAAGGAGCGCGTCTGCCGTATAATGGGAATCATTGATGGCGCTTCGAAAGATGGAGATTTGGTT
AGAGTTTTTACATATCTCATTACGAACATATATCGTCACGAGTCTCTATTTTGTTTTTCAAATAG
CCATAAAAATCAAAGGGTCCAAGGTCTGTCCGACCATCTGACCTCAGCAAAGAGGCGGAAGTACC
ACCCGCGCAGGAATAGCTAATCCAACCGGTTACGGTCCGTGAAGTCTTCTCTAACGGGCCACAAG
ATTAGATGAATGGTTAAATCCTGACGATTTTCATCCATTCATCTAATGTGGTGGCCCATTCCCAC
CCATTTATCTAATATGGTGGTCGAGAACTCCTGTCGGATCTCTTACTTCGTGAACTCATATGATT
AAATATTATTATTTGCTCCAAATTTCCGGATTTAACCCTTGCCTT
Right flanking sequence: Indices 12871 -- 13370
GTCGTATATGCATATATAATGATTATAATTTGCTCCCACCCAAATTTATTGATTTATGTATTATT
ATTTCCGTATACACAAAATAGAAGCCTTATGTTATCCGTGCTCCATTACGCTTCCCTCTTCCATT
ATCTCTTTACCCGGCTCGGTCTTCCGTTTCATATTATTCTTTCCCCCAAATAGCATCTCATATGC
GTTTGTGCCGACGCTGTTGCGAAAATATTTCATCTGCCGCGGGTCCGGTTCCTTATTGGACGATT
TTATTGACTCGATATAATTGGCTGCATCCACCTTGTTCCTAATGGTTTGCCCCTGGTCGAGTCCT
CCATCGAATAATACAACGCTTAAATCCGGTAGACATTCGCGGATGCTGGATGATTGCCGATGTGA
GCTGTCGCATAACCCCGATCTACGAAGTATTCCACAAATTGCTTTGTCACTACCTCGAGGGAAGC
GCAAGGGCTAGAATTAGGCCTAGAACGTATCAACTGCAAACTGCG
Found at i:31240 original size:23 final size:24
Alignment explanation
Indices: 31190--31234 Score: 83
Period size: 23 Copynumber: 1.9 Consensus size: 24
31180 CGGAGAAGAA
31190 AAAACTGCATAATCTTTTGGTTAT
1 AAAACTGCATAATCTTTTGGTTAT
31214 AAAA-TGCATAATCTTTTGGTT
1 AAAACTGCATAATCTTTTGGTT
31235 TCAAAAGCTG
Statistics
Matches: 21, Mismatches: 0, Indels: 1
0.95 0.00 0.05
Matches are distributed among these distances:
23 17 0.81
24 4 0.19
ACGTcount: A:0.33, C:0.11, G:0.13, T:0.42
Consensus pattern (24 bp):
AAAACTGCATAATCTTTTGGTTAT
Left flanking sequence: Indices 30690 -- 31189
GTTATGTAGGATGTTCGACACCTTATCAATTAGAGTATTTCACGCAATTTTTTTTATTTCCCCAT
TGCGTTGACCCACTCGAAACCGGCCGTATTGAAATCCGATTATCCGACTCGGCGGGGATCGCCAG
GCCGCCGGTCAACGACCTTTGCCGAACCTCTTTTGGCGAAGGCCAAACACATAACCTATGGTTCA
TTGAGCACGGGGGGGGTATAGGTGGCACCACCTAGTGCGCAGGGAGCATATTCGGGTATCGTGCG
CGGTAAAGCCATTTCTGGCCGGGGGACCTGAGACAAAGAAGTGTGCCCTTTGGCCCTAAGAGGTT
TGATTCGGCGATTCGCCATCGCTAGTTCGGTTCGGTCGTTTTTCGGCCGATTACGTTTCGCCTCC
TTCGGACCGACCCTACGGGCCTGTGTTTTACGTAATGTGATGTCGTATGGGGCCACGGGCCTTGT
GCCTTTTCTTTACCCGATACACTGCTCTAAATATACGGAGAAGAA
Right flanking sequence: Indices 31235 -- 31734
TCAAAAGCTGCTGAATCGGAAGATGATGCAGCGTATGCGACGAAGGCGGGGTTTTTAAAGTTGAT
GGAGAACAAGGTCCGGAGGAGGGTTTTAGGCATTTTGATGGAAAATAAGAACCTTTGGTCCTTAT
TGATTGCGGAACCCAGATAAGTGCGCCAGCCTCGGTGCATCGTGGACTTGTACTTTTTCTCGCGC
AGGACCCATACCGGTTATCGGTCGTCCAGGCGCGCATATCAGGCGTCGGAAGGGACATACGCCTC
CGTCCCCGCCGCCCCGAGGCGCTGTCTGAGCTTCTTACTCGGGCAGATTGGCCCGGTACGGTTCG
TAAGAGACGACGGCCCCCCGGCCGGCCCCTGTCTGACGGTCCAACCTCTCAGGGGGCCTGTCAGC
CGCCAGTCCCCGGCCCTTCGGACGGACCCACAAAGTTTCTCGTGTTCCTTGGTCAGTTGTTCCTT
CCCGCTCCTCTGTTGTCTATTTAGCACTCTCCGCCGCGGTTGTAT
Found at i:38397 original size:2 final size:2
Alignment explanation
Indices: 38384--38429 Score: 83
Period size: 2 Copynumber: 23.0 Consensus size: 2
38374 CCGGAAAGAA
*
38384 AT AT AT AA AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
38426 AT AT
1 AT AT
38430 GCTGCGCCCG
Statistics
Matches: 42, Mismatches: 2, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
2 42 1.00
ACGTcount: A:0.52, C:0.00, G:0.00, T:0.48
Consensus pattern (2 bp):
AT
Left flanking sequence: Indices 37884 -- 38383
GTCCAGCCAGATGAGCGCCGGCCAAGGCGGCGGGTTGGAAGTCAGAAGGCCCGCAGTACCCGGCT
AAACCTCCGCTTCGGGAAAGGGAAGGCACTGGAAACACCAGTAATCGGGAAGGGGCCTAGGTATC
TGCTTGGTCTAAGCGGATTTAACTCTACACAGCTTATCAAAGCAACTCTGACGGATCTCAGATTG
GCTATGACCGACACGGTACGGTATGCGGTTTGCTCCCTGTCAGCCCCTTGGATCTCTAGCTATGA
GAAAAAGCGAACAGGCGGACAAAGCGGCGGCTTGAAAGTCCTCTAGCTTCTCCAGCGAGCTATGG
GGTACGGCGCAGCACAAAATAGTTTTAATTCACTTGGTCCACCTGCCCCGGCTCCCCCGGCGAAA
CTTCCCAAGGATGCTCGAACTCTGCAAGGCGATAAGTATAAACTCTGGAATCGCTGGAAAAACGG
AGCAACCCGAAGAGCAGATCATTGGTTTTCGAGAACCGGAAAGAA
Right flanking sequence: Indices 38430 -- 38929
GCTGCGCCCGTAGTGAAAGAGGGACCAAAGTAAGTAGAGTTAGTGAGCCGTGTAATGGGCAACTA
TTTCGCACGGTTCGGAGGGCACTTCAGTAGGCCCTACATGGGCTGAAGTCCTGACCCCTATTCCT
TTTGATGATGCCAGAAGTCGTTTCGATATACGATTTTATCTCGTTTCTATTTTATTTATCATATC
CGATCCGGAAGTCACCTTTTTATTTCCCTGGGCAGTTTCTCTTAACAAGATTGGTTCGTTTGGAT
TCTGGTCTATGATGGTATTTTCACTTATTTCGACGATTGGATTTGTATATGAATGGAAAAAGGGC
GCTTTAGATCGGGAGTAACTCTTCATTCGCGAAAGCGAATGGAGTGGAAAGAAAAAATATAGGCC
CGTAGGGCTGAAGCTCTCATCGCTCTCTTTCTCCCTCTCCGGACACTTTTTTGGTCCAAAGGACA
CGAAACTTGCCGGGTATCGTGTCCTTTGGACCAAAAAGAATTTTG
Found at i:43257 original size:12 final size:12
Alignment explanation
Indices: 43240--43264 Score: 50
Period size: 12 Copynumber: 2.1 Consensus size: 12
43230 GTTGCATCTC
43240 TCGCTTCATGTT
1 TCGCTTCATGTT
43252 TCGCTTCATGTT
1 TCGCTTCATGTT
43264 T
1 T
43265 TGATGGACGG
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 13 1.00
ACGTcount: A:0.08, C:0.24, G:0.16, T:0.52
Consensus pattern (12 bp):
TCGCTTCATGTT
Left flanking sequence: Indices 42740 -- 43239
TAGTATTCGATTCCAATGCAGCTTTATCGAAAGCTGCCGAAATTTCATGTCTGGGTTTTTCCCTA
GCCAATAAATAGGCAATCTCTACCTCTAATTCAGCGATATAATTGCCGTTGGGCGAACGCTGTGT
CCGTGAACTTCCGTTTATCGAAATCATTTTTACATAATGGGAAGTCTACAGCGTAACTAATAGTC
TTCGGGCGAAATTCGGAAAGGGTTGGGGTGTCAGGTAATGGTGCATCATTATCCTTTTCTCGTTC
GGTGCGTTAATTGGATCCGTAACCTTGCGCGGCAGGAACTCCTTTAGGCTCAGAACCTTTCTTAT
TTGGGCCACGAGGCTGGACTCTCTATGTCATCTAGCTCACGATAACCCGTTTGAAATTTCCTTGT
GCCAGCCATATGACAAATGTAGTAAACGAAGCTCGGTATAAGTCCCGGAGTCATACGCAAACAAC
CCTTGGCTCTACTTCCTTTTTTTCGGCACAAGTAAGTTGCATCTC
Right flanking sequence: Indices 43265 -- 43764
TGATGGACGGCGTAGGAACCTACGAAAGAGCCTGTATTGAAACGGCTTCGGCCTCCTCCACGGTT
TTACAGAACTATGGAGCTGGAGCCGGTTTGAAGGAAGCCATGTTAATTACGATGAAGTTGCGTTC
TGGCATGTTAAGGCCTGTCCCAACAACGCCAGCCGCGATATGCCACAGGTCGCCGGGCCTCACTC
ACCTTACCACCGAGAGTCATTTCATTACTACTCCCGATAGGTCCCAACCTGACAAATGGGTTTTT
GCGAGTTACATACATAATTGTCAAACATGCGGGCTGATGGGAACCCCATGGCGCGGCGGCTCCGG
GAGCATGTTCTTATAACGCTATCCTAGAAAGCCTTATCCATTATATTGAACCAGTTGGAGAGGGT
CAGGATAACCTGGTAATCCAACACTTTATTTTATTTTCCTTCTATAAAAAATTTGTGTTTTTGCT
GCCCCGCCGAAACACACTTTTATCCGAGTTATAAGGTGGATCGGC
Found at i:43908 original size:17 final size:17
Alignment explanation
Indices: 43886--43922 Score: 65
Period size: 17 Copynumber: 2.2 Consensus size: 17
43876 ATAATTTGCG
43886 TATTCGTTGAGTTCCAT
1 TATTCGTTGAGTTCCAT
*
43903 TATTCGTTGAGTTTCAT
1 TATTCGTTGAGTTCCAT
43920 TAT
1 TAT
43923 CTTACCACGC
Statistics
Matches: 19, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
17 19 1.00
ACGTcount: A:0.19, C:0.14, G:0.16, T:0.51
Consensus pattern (17 bp):
TATTCGTTGAGTTCCAT
Left flanking sequence: Indices 43386 -- 43885
GTTGCGTTCTGGCATGTTAAGGCCTGTCCCAACAACGCCAGCCGCGATATGCCACAGGTCGCCGG
GCCTCACTCACCTTACCACCGAGAGTCATTTCATTACTACTCCCGATAGGTCCCAACCTGACAAA
TGGGTTTTTGCGAGTTACATACATAATTGTCAAACATGCGGGCTGATGGGAACCCCATGGCGCGG
CGGCTCCGGGAGCATGTTCTTATAACGCTATCCTAGAAAGCCTTATCCATTATATTGAACCAGTT
GGAGAGGGTCAGGATAACCTGGTAATCCAACACTTTATTTTATTTTCCTTCTATAAAAAATTTGT
GTTTTTGCTGCCCCGCCGAAACACACTTTTATCCGAGTTATAAGGTGGATCGGCCACACGTTCGA
ACATGTAAAACCGCAGAAGTTAATGGAACTGCGCCGCGTGCAACGCATGGCGCCTCCTCGTCGCA
GTCGGGTTGCCTTCCGCCAGCCTTCTTCGAGAGCGATAATTTGCG
Right flanking sequence: Indices 43923 -- 44422
CTTACCACGCGCTTCGTCGAAAGGTCTGTGGAACACGACACAGGGCCTGTAACCGGGACCAAGAA
TATTTGCTATTTAATATGTCGCGGGTAAATTCGGCATTTGGATTCGGGAATCATCTTGACTTGGC
TGATTCAATATACGTTCGAAAATTTTGTCCGGACTCACAGGCATTGTACGGGGTTTGCACTGGGG
AGCCAAGTAGTGCTTGGCTTTGATTAACTAAAATTTGCTTGACATATGATGTTGAGCTGAGCTCG
ACTTTGTTATCTTCAAGCTTCAATTTGTACGTGCACTTCGGATACCCCGCGTGCAGCGTTTGAAC
AGGGTTTTGGTAGTGATAGATGAAGAAGACCTCACCCTCGGTTTTCCGAAACCGGGGGGGGGAAA
TCACATCAGCGAGTGAGCGCGCTTGTTTGATGCCCTCCTGCATGCTCCAGTAGCAATCCCTCGCC
ACGCGCACGATCCGATTAGTTGATGTACTTCATCGACGTATATGA
Found at i:52010 original size:4 final size:4
Alignment explanation
Indices: 52001--52028 Score: 56
Period size: 4 Copynumber: 7.0 Consensus size: 4
51991 AGGCGGCAGG
52001 AATA AATA AATA AATA AATA AATA AATA
1 AATA AATA AATA AATA AATA AATA AATA
52029 TATATGTATT
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
4 24 1.00
ACGTcount: A:0.75, C:0.00, G:0.00, T:0.25
Consensus pattern (4 bp):
AATA
Left flanking sequence: Indices 51501 -- 52000
ACTTCCGTATCCGTCAGTACCTTGTGGGAGCCTCACATTGTGGGCGTAAGGGCTAGTAAAAAAAG
GATGAAAAACTATTCAATGAGGCCCGAGGGGGGGGCACTGTCACGACCAAAATACGACGGAAAAG
CGCACATCTCAGGAAACTGGCTCGATCGGATGCGGGGAGCCGGGGGACGGGAAACTGTCACCTAC
GGTTCTGAATTGGCGGCCAGGGCCCCTGATCGACCATAACATGCTAGCAAATGTTGTCACCATCC
CAGGTACCCAAGATATTGTGTTCGGAGAGGCAGATAGATAAGACTACTAATTGCACAGGTAGGAC
CAAAAAAATCTATATTGTTTTCCAGAAACTTATCCCTATCATTTCCCGCCCTTTTTTTGTCCGAC
AGTGCCCCCCCCCTGGCCTCCTGTTTCGAATATAGAAATATATAGATATATCTATATATTTTGCT
TGATTGTGAGATTATCACCGATATGATGCGAATGAAGGCGGCAGG
Right flanking sequence: Indices 52029 -- 52528
TATATGTATTTTAAAATCTTCGAACCTGCCCTACAAGTCTCCACAATGCTTCCCTTCGGCAGCCT
TATGAATTGCCAAAAAGCAAGCACAGGAGAGCTCCAAAAAACATGGCCGGTTATCTATCAATAAA
TAGATGAACCTGAAAAACGGCCTGTAGGGGATAGAAAGAGAAAAAAAAATATATATATATTTTTT
TTGCCCCCGCGCCGTTGCGAAAGTTCGGCAACGTCAGTAAAATCTTTTTTTTGACACTTGTTCGA
AGGACACTAGACTCGGGTACGTCCTTCTTCCTATAGTCTCGTGCCCTTTGGTCCAACGGGTTCGG
CCCCCCCCCAGCAGGGGGGGCGGGCTCGACCCGAACCCTTCAGGTCCTTTTTTCGTAAAGCCGTT
CCCTGTCTGAACGTGTTTACGCACCTTCGGACCCAGGCACGTAGTGCGCGGGGAGCGTGTTCTGG
CCGGTATGGTGCGCGGTAGAGACATTTACGGCCTTCGGCGCTTAT
Found at i:64215 original size:27 final size:27
Alignment explanation
Indices: 64185--64240 Score: 67
Period size: 27 Copynumber: 2.1 Consensus size: 27
64175 ATAAACAATC
* * *
64185 ATGCAAGAAAAGCAGGGTATTACTGAT
1 ATGCAAAAAAAACACGGTATTACTGAT
* *
64212 ATGCAAAAAAAACACTGTATTACTTAT
1 ATGCAAAAAAAACACGGTATTACTGAT
64239 AT
1 AT
64241 TCAATCAACT
Statistics
Matches: 24, Mismatches: 5, Indels: 0
0.83 0.17 0.00
Matches are distributed among these distances:
27 24 1.00
ACGTcount: A:0.45, C:0.12, G:0.16, T:0.27
Consensus pattern (27 bp):
ATGCAAAAAAAACACGGTATTACTGAT
Left flanking sequence: Indices 63685 -- 64184
AGGGAAAAAAAAATAAATCATGTCATATATTTTAGGAACCAATCTGAATTCCAATAAACAGGTGA
AAATTGCCTTAACTCGAATCTTCGGAATTGGGCCCAAAAAGGCAATTCAAGTTTGTGATCGATTA
GGCCTCAGCGATAACATTAAGGTTAATAAGTTAACTAAATATCAATTTGACCAAATTCTGGAAAT
AATAAGTCAAAATTATTTAGTCGATTCGGAATTGGAGAGAGTCATTCAGAGGGACATCAAACGAT
TAATTAGTATTGGTTGTTATCGCGGGTTTCGCCATAATGCAGGATTGCCCTTACGCGGCCAACGG
ACTCATACTAATGCTAAGACTTCTCGCAAATTTAGAGACATTTCGATCAGAAGTTGAGAAAAGTT
TTTTTCCAGTTCGTACAAAATATCTTTGTAATTAGTGAACGGATTGGATGGATCATAAAAAAACG
AAATCGATGATATCGAGCAACACCAAAAACATTCAATAAACAATC
Right flanking sequence: Indices 64241 -- 64740
TCAATCAACTTTTGGTAATACGATTATTACTCTAACGGATCATGACGGAAATACAAAAACTTGGT
CCTCCTCGGGTTCAGTGGGGTTTAAGGGATCTCGTCGCTCAACCAATTATGCTGCTCAAGCAACC
GCAGAAAATGCCGCGCGAGCTGCCATTCAACTTGGATTTAAGTTTGTTGAAGTGAGAATCAAAGG
ATTGGGTTATGGAAAGGAATCTTCGCTACGTGGTTCAAAACTAGGAGGTCTTATTATTACCAAAA
TTCGCGATGTAACCCCAGCGCCACATAATGGATGCCGACCCCCTAAAAAACGTCGTGTTTAAATA
TCATCATAAAGTGCTATGTCATCATAAAATGGTAAATTGAGGTTCAAGAGTAGAAAAAATTTTTT
TAGGGTCCGAGGGAGACTTCTTTGGGATACTTCTTTGGCTTCACGGGGCTTAACCCGTCCCTCGT
AAAGGCGAAGAAGGAGATCTACAAGCCATGTCTGGCCCTCGGCGG
Found at i:73207 original size:2 final size:2
Alignment explanation
Indices: 73194--73231 Score: 67
Period size: 2 Copynumber: 19.0 Consensus size: 2
73184 GAAAGAACAA
*
73194 AT AT AT AG AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
73232 TTATCCACTC
Statistics
Matches: 34, Mismatches: 2, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
2 34 1.00
ACGTcount: A:0.50, C:0.00, G:0.03, T:0.47
Consensus pattern (2 bp):
AT
Left flanking sequence: Indices 72694 -- 73193
TTCCCTACTCGGCACAGGGGAAGGGGCTTAAGCGTCTGCTATATTTCAGCAGATCGGATTCAACC
AAGTCCTCATCAAATAAGGCTCCCAGGGACCCCGCCGGACGGGTCGATACACGGAAAAAGAATAT
TTGGGCTGACGCGGATCTTTGGATTTTTGGATTTTGGGAAAAAAATACGCTACGCGCCTCGTTTC
GTAAATGCACCATGTTCGGCGGGGTCTCAAGGACGAGGGGGGCTCATATAAGAGAATGCTTGGTT
TTATTCCTTCCCACCCACTAGAATCTCACATGAGCGCTATAGTGAGAAAGCAAGTTACTTCATGT
AACTCACGCCACTTGTAGGCCCACATAGGTCACTGAAAAAAAAAGCCAAGACCTTGCGACAGAAG
CAAATCCAAAGTAAGGTTGAATCGGAGAGCCGTATGATGGGCGACCATCTCGTACGGTTCGGAGA
GGGCTCGAGTACCAATGCATTCAATATGTGTCTGGGAAAGAACAA
Right flanking sequence: Indices 73232 -- 73731
TTATCCACTCTATTCAATTGCATGAAGGGTTAAGCACAAAACATGTGCTTCGCCTCCAGTTCTCA
AATACGAAGTATAGTTGGGAGAGGCAGGATTCGAACCTACGTAGAAAACCTTCAGCAGATTTACA
GTCTGTCGCTTTTAACCACTCGGCCACTCTCCCTATGATAAGTAAGCTTCTATTTTCCGGCGGTG
CAACGGGACTCTGACGAAAAATGGGTCAATCCACGCGTGTACCGTTGTTCCCATGGACTAATCGA
ACAAGTAAAAGGATGTACCGTTGATATATATTATTCATTGCACACTTTACGCATCCTACAGGATT
TGAACCTGTGACCTTCAACTTAGAAGGTTGTTGCTCTATCCAACTGAGCTAAGAATGCGGCACAT
TACTAACCATTTCGCAAAAAAAAAGTGAATTCCAGAGAAGAAAGAAGCTTGCTTCTTTCTTCTCT
CCCGCTTTATTCGCATCGCGAATGGAGGCCGAAAGAGAAGAAAGG
Found at i:93809 original size:10 final size:10
Alignment explanation
Indices: 93794--93893 Score: 125
Period size: 10 Copynumber: 10.3 Consensus size: 10
93784 GCTGCAATAG
*
93794 ATATCTAGAT
1 ATATCTATAT
93804 ATATCTATAT
1 ATATCTATAT
* *
93814 ATATATCTAT
1 ATATCTATAT
93824 ATATCTATAT
1 ATATCTATAT
93834 ATATCTATAT
1 ATATCTATAT
* *
93844 GTA-CTAGAT
1 ATATCTATAT
93853 ATATCTATAT
1 ATATCTATAT
93863 ATATC--TAT
1 ATATCTATAT
93871 ATATCTATAT
1 ATATCTATAT
*
93881 ATATATATAT
1 ATATCTATAT
93891 ATA
1 ATA
93894 GATATATAAT
Statistics
Matches: 77, Mismatches: 10, Indels: 6
0.83 0.11 0.06
Matches are distributed among these distances:
8 8 0.10
9 7 0.09
10 62 0.81
ACGTcount: A:0.41, C:0.09, G:0.03, T:0.47
Consensus pattern (10 bp):
ATATCTATAT
Left flanking sequence: Indices 93294 -- 93793
AGCATTGCTAAATGACTAAATTTCGCTAATATGGCTAAATCCCGAGGATTTGTAGATAAATATAT
GTAATTAATACTCCAGAAGCCTCATCGCTAATGACACCTTCGCTAAATGACGCATATTTACCTAA
TATGACCAAACCCGTTGGGGATCTGTAGTATAATACGGAGAGGAATACCCCTTAATTAATATGTA
ATTAAAGGGTCGGGAAAGGAATATATAATAGGAATCTATATGGGATATGGAAGAATTCCATATAA
TTGGGAAGAGTTAATCAATTGAATTGGAATAAATAGAAAATGGATTGATAAATAAAATAAATTCA
AATATATATATACATATTATATATTTGTGTATAACGGAGAAAATGCATAAATCAAATAGATTCTA
TTATTTATAGGAGAGACTATTAAATTCATGTTTATTCTTTCTTCGCCCATCTCCCGAAAGAAAAT
GAGCTACTATTTTTCTTATTCGAGAGAGACGATGAGCTGCAATAG
Right flanking sequence: Indices 93894 -- 94393
GATATATAATTTATGGGTCAGGGGAGGAGATAGCCTTGACCTCCAACCTCCGAAGATACTAAGGA
CCTGGATCTTCCCTGGGTTACCACGTTCTTGAGATCTGTTACATAGGCCCCTAGTTTTCCCTTGG
GAACGTCCAGAGACTTTCATCGTGGAAGTGGCATAGGAACTCCGGGCGGGGATCATGGCACTTCT
ACTAGAACCTTAGGTACGCTTTCGCTAGGAGCTCGAACTGGACTGAAGATAGGAAGCATAGATCG
AGGGGGCACAAGGGAACTATTTTTTCGGTCACGCGGTACGTACCGCCTGTAGGTCCCGTAAGCAT
CTCGTCTTTATGGGGTTTGTAAACGGTGTCCGCTACATTCCGAAGATCAAGAATTATATCTGGTT
GTTGGGTGCAGGGCGGGGGACTTGGTTCTGTCGGCTACCACAAAACCGGGAAACTGTCCGACAAA
ACAAAGGGCACTTACGACCAACTCTGCCTCGGAATACCTTTCAGT
Found at i:93814 original size:2 final size:2
Alignment explanation
Indices: 93802--93901 Score: 101
Period size: 2 Copynumber: 49.5 Consensus size: 2
93792 AGATATCTAG
* * * *
93802 AT AT AT CT AT AT AT AT AT CT AT AT AT CT AT AT AT AT CT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
* * * * *
93844 GT ACT AG AT AT AT CT AT AT AT AT CT AT AT AT CT AT AT AT AT AT
1 AT A-T AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
*
93887 AT AT AT AG AT AT AT A
1 AT AT AT AT AT AT AT A
93902 ATTTATGGGT
Statistics
Matches: 77, Mismatches: 20, Indels: 2
0.78 0.20 0.02
Matches are distributed among these distances:
2 75 0.97
3 2 0.03
ACGTcount: A:0.42, C:0.08, G:0.03, T:0.47
Consensus pattern (2 bp):
AT
Left flanking sequence: Indices 93302 -- 93801
TAAATGACTAAATTTCGCTAATATGGCTAAATCCCGAGGATTTGTAGATAAATATATGTAATTAA
TACTCCAGAAGCCTCATCGCTAATGACACCTTCGCTAAATGACGCATATTTACCTAATATGACCA
AACCCGTTGGGGATCTGTAGTATAATACGGAGAGGAATACCCCTTAATTAATATGTAATTAAAGG
GTCGGGAAAGGAATATATAATAGGAATCTATATGGGATATGGAAGAATTCCATATAATTGGGAAG
AGTTAATCAATTGAATTGGAATAAATAGAAAATGGATTGATAAATAAAATAAATTCAAATATATA
TATACATATTATATATTTGTGTATAACGGAGAAAATGCATAAATCAAATAGATTCTATTATTTAT
AGGAGAGACTATTAAATTCATGTTTATTCTTTCTTCGCCCATCTCCCGAAAGAAAATGAGCTACT
ATTTTTCTTATTCGAGAGAGACGATGAGCTGCAATAGATATCTAG
Right flanking sequence: Indices 93902 -- 94401
ATTTATGGGTCAGGGGAGGAGATAGCCTTGACCTCCAACCTCCGAAGATACTAAGGACCTGGATC
TTCCCTGGGTTACCACGTTCTTGAGATCTGTTACATAGGCCCCTAGTTTTCCCTTGGGAACGTCC
AGAGACTTTCATCGTGGAAGTGGCATAGGAACTCCGGGCGGGGATCATGGCACTTCTACTAGAAC
CTTAGGTACGCTTTCGCTAGGAGCTCGAACTGGACTGAAGATAGGAAGCATAGATCGAGGGGGCA
CAAGGGAACTATTTTTTCGGTCACGCGGTACGTACCGCCTGTAGGTCCCGTAAGCATCTCGTCTT
TATGGGGTTTGTAAACGGTGTCCGCTACATTCCGAAGATCAAGAATTATATCTGGTTGTTGGGTG
CAGGGCGGGGGACTTGGTTCTGTCGGCTACCACAAAACCGGGAAACTGTCCGACAAAACAAAGGG
CACTTACGACCAACTCTGCCTCGGAATACCTTTCAGTAACCTGTG
Found at i:111608 original size:21 final size:22
Alignment explanation
Indices: 111576--111617 Score: 52
Period size: 21 Copynumber: 2.0 Consensus size: 22
111566 TTAGAGTAAG
111576 AAAAACCACTAC-AAAGAAACA
1 AAAAACCACTACTAAAGAAACA
*
111597 AAAAATCC-CTACTACAGAAAC
1 AAAAA-CCACTACTAAAGAAAC
111618 GTATGAGCCA
Statistics
Matches: 18, Mismatches: 1, Indels: 3
0.82 0.05 0.14
Matches are distributed among these distances:
21 9 0.50
22 9 0.50
ACGTcount: A:0.60, C:0.26, G:0.05, T:0.10
Consensus pattern (22 bp):
AAAAACCACTACTAAAGAAACA
Left flanking sequence: Indices 111076 -- 111575
CCCCAAATAAACTTGCCGTATTATCTCCGCGAAAGAGACAAGAGCCTATGAACTCTGTATCAGAG
TCTTATTCCGGTATAAGTGCGAATTGAAACCGAGTGTTTAACCATTATTTCGCTATTCCCGATAT
TATAGCGACGGAGGCCCTTGATCCAATCCAGCGAGTTTTCTGTTATGTTTGTTTCTTCGGTGAAA
ATGAAAGAAAGGGGGAGGGGTAGACGCCAGCCTAACCCAGGAGGGCCTGGTGGCTCCTCGGTCAA
GTCCCTAACTTTCAGGGCGGGCTCCGCCCTATAAGGACTAGGTCTGTATAGGGCGGAGCGGATCG
GTGCTTAAGTAAGCTGCACAAATTGCTGAGACGTCTAAATGCTTTCCTTGATAGCTGGAAGTTCT
TCAAAAGTATGAAATGCGGGAGGGCTTGGGACCATCCATTCAAGTGTCGTTGAATTCTGTTCAAC
AGCCCAAGGACTTGGAGCACACTTGTTTTCACTAGTTAGAGTAAG
Right flanking sequence: Indices 111618 -- 112117
GTATGAGCCAAAACTACTAAAGGCATTCCATCCAGCGTAAGCATCTGGATAATCAGGAATGCGAC
GTGGCATACCCGCAAGCGGTTTTTTCCTTATTTATCAAATGTTAATGGATTGTGACTAAATATTT
TTCTTTTGTAAACTTCTTCATCTGGAATTAGTCCTTCAGACGTTTCGGTGTGTTTAAATCCCAAT
GTTGAATCAGTTATTTTATTGGTATTAAGAACTGGTTCATAGAGATCGAAATAGTACTGTTCCCG
AGCTAAATAATCCTTTTCATTCAGTAATAGTACCTGTTGAACCACCCACATGACTCAATAATAAC
TAAAATTGTCATGACCATATTTCCAACTGGAATTATAAATATATCTGTTATCGGATAATTTGGAA
GGGTGATAGTATTCAGCAAGTCTATCGCTTAATTTATAACCACTACCTACATATTGTTTCCCATT
AACTAAATTATGCCAAAGATAGATTCCAGTTTCCGTTAGATAATC
Found at i:126687 original size:24 final size:24
Alignment explanation
Indices: 126655--126701 Score: 76
Period size: 24 Copynumber: 2.0 Consensus size: 24
126645 TCATTGCCTT
* *
126655 TTATTTATCTATGATGATTCATCA
1 TTATTTATCTACGATAATTCATCA
126679 TTATTTATCTACGATAATTCATC
1 TTATTTATCTACGATAATTCATC
126702 CAGATTTTCT
Statistics
Matches: 21, Mismatches: 2, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
24 21 1.00
ACGTcount: A:0.30, C:0.15, G:0.06, T:0.49
Consensus pattern (24 bp):
TTATTTATCTACGATAATTCATCA
Left flanking sequence: Indices 126155 -- 126654
ATATAAACAGTGAAGAAATAACACACTTGATTTTCGGTGAGCAATTATTATATAATGATACGTAA
AAGGTAATATAATAAATACCATAATACGTGATACAAAAAATGATATAAAGCACGCATAACCGAAC
GAATTGTGTCAGATACGTAAAGTGATTTAGTTGAGTCCGAAGATGTAAGACGTTAGTTCTACCTA
ACATTTTTTTTCTACCTGCAAGAGAAATGTAAAAAGTTGGAATATAAGGTACTTCTATATAATTT
TTGGAAATATGGACTAAAGCCCTGCCGGGCGGGAGAGGAGATCGGAAAAGTTATATCTAGAGCCG
GACCTCGTGTTTCGTGGGTCGCTCCCTTCTCGCCCATTTTTTTGTTTTCTCACCCGTTTTTGGCG
GGAGTCGGATTCGAACCCACAACATTCAGATTATGAGCCTGACGAGTTACCAATTACTCTATCCC
GCGAACGGCCAACGAAAAAAGAGATATATTTTTGTTCATTGCCTT
Right flanking sequence: Indices 126702 -- 127201
CAGATTTTCTATTAGGAATTAGACTAGATTCGAACCAGATTTGTCTAGGTTCAAAAGGAAAAAGG
GGCGCGCCGCAGCCCGCGCTAGCCCACTGGGTTAAAATGACGGATACAATTTTGGTGTTCACCCA
ACTAAAGCGATTGGCTGGAGACAAAACCACGGTAGCTTCCCTACCCGCGCACAGGTCATGAATTA
GGGGTGTTATGAAGAAGGCAGGTAGATCACCCACCCTAGGCAACAACGGGCCCGCCGGTAACATA
ATGAAAAAGTACACAGGCACTACGTGCTTCTGGAACATACTTCTTTTAGTTTCTGTCCGGAGCGA
TAATTTCATGGAATACGGGAAGCGATAAGGAAGCAGGAAAGTTTATAGAGGGGGTTGAGCTACGG
GTTTTGAACCAACCGTAGCTCCACCTCGAGGAGTCTGTGACCCCTAAACCAGCTTGCCGAGAAGA
CCTTACACAAAGATACATTGAGGAGTTGCTGTCCCCCCCCTCTCG
Found at i:127327 original size:15 final size:15
Alignment explanation
Indices: 127304--127334 Score: 53
Period size: 15 Copynumber: 2.1 Consensus size: 15
127294 TCCTTCAGAG
*
127304 AATTCTATATAAATA
1 AATTATATATAAATA
127319 AATTATATATAAATA
1 AATTATATATAAATA
127334 A
1 A
127335 TGAAACCTTA
Statistics
Matches: 15, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
15 15 1.00
ACGTcount: A:0.58, C:0.03, G:0.00, T:0.39
Consensus pattern (15 bp):
AATTATATATAAATA
Left flanking sequence: Indices 126804 -- 127303
TGACGGATACAATTTTGGTGTTCACCCAACTAAAGCGATTGGCTGGAGACAAAACCACGGTAGCT
TCCCTACCCGCGCACAGGTCATGAATTAGGGGTGTTATGAAGAAGGCAGGTAGATCACCCACCCT
AGGCAACAACGGGCCCGCCGGTAACATAATGAAAAAGTACACAGGCACTACGTGCTTCTGGAACA
TACTTCTTTTAGTTTCTGTCCGGAGCGATAATTTCATGGAATACGGGAAGCGATAAGGAAGCAGG
AAAGTTTATAGAGGGGGTTGAGCTACGGGTTTTGAACCAACCGTAGCTCCACCTCGAGGAGTCTG
TGACCCCTAAACCAGCTTGCCGAGAAGACCTTACACAAAGATACATTGAGGAGTTGCTGTCCCCC
CCCTCTCGAGATAGGAATGGACCAACGAGGGACGGACTTCGATGATCCCATCCCGATGGCGTTTT
CGAGTAAATCCTGGCTGGAAAATATAGATCATACTTCCTTCAGAG
Right flanking sequence: Indices 127335 -- 127834
TGAAACCTTATTAACGAATTAACGAGGTTGAGCGGATAATGACTTATTCTTACAAAGGGGTTGGG
ACCGGAATTGTAACCGTAAGTAACCATTTCAACTGGGTAACGGCGCGCGTAAGGGCTCAGTCCCT
AATAAATAACCTTAGACTAAGAATTTATAAGGGATATCGTCCCGTATAGATCAGGTGTTTATGAT
ACTCTACGAGCCCCGGACCCGTATTTGAAGTGAAGGTCTTCGGTGAAGGAAATGCCTTCGTTGAA
GGAAGCCTGGAAGCCGGGAGTATTCGGTTATGTTCGTAAGGAATTTCCCCAAGCACAACAAAGGT
TTTGGAGATTTATATAATTAGCCAGCTTTAGATATTGCAATCCAATCCTCTCTTTTCCGAGGAGG
GAATAAAGCTATTATGATTCGAGGAATTCTTGGAGTTGATAGGAAAGGTCTAGCCATTTCCATCA
ATGAGTTGAAGGAGTTGCCACAGGTTACTGAAAGGTATTTCGAGG
Found at i:139389 original size:22 final size:22
Alignment explanation
Indices: 139364--139407 Score: 79
Period size: 22 Copynumber: 2.0 Consensus size: 22
139354 GAGCCCCGAT
139364 AATAAACATAGGCTACAATAAG
1 AATAAACATAGGCTACAATAAG
*
139386 AATAAACATAGGCTATAATAAG
1 AATAAACATAGGCTACAATAAG
139408 CCCCTCGCAT
Statistics
Matches: 21, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
22 21 1.00
ACGTcount: A:0.55, C:0.11, G:0.14, T:0.20
Consensus pattern (22 bp):
AATAAACATAGGCTACAATAAG
Left flanking sequence: Indices 138864 -- 139363
CGAACATATTCCGAATCGAGACAGAAACTTCTAATATATTTTTCATGGGTCCATCGTTGGTTGCA
CCGATCGGCTTCGCTATTCCTCCAAGTCACTTTACTGTAATCTGTTAACTCATCTATCACAGGCC
TCATCAAATTTACTATTAAAATATTTAACCCTATTAGTACTATAACAATATGCGTTGGTTACAAT
CTCCTTAACTAAATCTTTAGAAATTAAGGTTTGTGAAGAAGACTTCAAATTTTAATACATGAATT
TCGGTTGATAAACCGGAGGAGTATAATCCGAAAGGTTTGATTCATAAATATATTTATTAAAACCG
GTCCCTAGCAGCCTGCATATGAATCCTGAATTTTATTTGCAAGTGTACACAGATGATTTCTGTGA
GCTATGCCGTATCCTGTTCGCAGTTCCAGTGAGCTCTTAGCTGTAAGCTGCGAACATACAGCAGC
CGCGAGCGCATAACCAACTTCCTCGCGGAGAGCAGGAGCCCCGAT
Right flanking sequence: Indices 139408 -- 139907
CCCCTCGCATCGGGAAGGCACCTCCTTCGGTGCCTCTACCACTCGAATGTAGTAAATCAATTATT
TCATGGAATAATAATAGTAATATACAAAAGCATATATGGATAGAGAAAGCACAGCTTAATAATAG
AAGATACGTATATAATAAGAAAACCATAGGGCGCATAGGGTGTCACTACTAATAAATGAATTTAG
TAGTGACTTTTCATTATTTAGGAGAAATAAACGCGTTGGAATTTTTATTTAATGGGGGGGCCGCC
GGCCGTGGGCGTGAATCCACGAGCCGGCCGTATCGGCTGGCGGAGAAGCCATTTCAGGTCCATTA
CAAAGGACCTTTCTTTCGGGGAACCAAAGAAGTATCCTTTGGGCCCTTCCGATGAAACAAAAAAT
GCTTTTTTTCCCATCATATATTTTAACTCTTTCTTTCGTCATAACGCATTATTCCACCACCCATC
TCGGATCGTCAGGATGATAATTCATCTGGTTTTCGACCACAACAT
Found at i:146047 original size:21 final size:21
Alignment explanation
Indices: 146023--146065 Score: 59
Period size: 21 Copynumber: 2.0 Consensus size: 21
146013 AAAGAATAAA
*
146023 TTTACAAAAAAATCTTTTTTT
1 TTTACAAAAAAATATTTTTTT
* *
146044 TTTACGAAAATATATTTTTTT
1 TTTACAAAAAAATATTTTTTT
146065 T
1 T
146066 GTTGCTCGCG
Statistics
Matches: 19, Mismatches: 3, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
21 19 1.00
ACGTcount: A:0.35, C:0.07, G:0.02, T:0.56
Consensus pattern (21 bp):
TTTACAAAAAAATATTTTTTT
Left flanking sequence: Indices 145523 -- 146022
CCGATGAGAAGTGGGTAACAATGTGTTTGTCCTCCGAGGAAGCCAATCGTGGATTGGAGGTTGCC
CGAGCCAAGCCCTTGGCGTTTTTTTTCGCATATCCAAGTTCCAAGGCTTTAGTTATTAAGTCCGT
TATGGGAGCAATTAGTTGTGGACGAGATCGGAGTCTTACTTGGTTGACACCGGATATCTTGCCAG
TGCTTGAGATTTCCACACTTCGGGTGCCGTAATATATTACTAATGCGCCCAAGTATTTGGCCATC
CCGGACTCTGCGTGTAAGATTTTATGTTCGTTTATGTCCAACTTCAGTTCTTCCTGCAGGAAGTT
TTGCACGGCTTTTATAATATCCAGGGCATCTCGTTTGGTGCCTATAACACCTAAAATTATGTTAT
CCGCGTACCGTAGGTACTTAAGTCTTTCTAATCCTTCTTTCTCAGCCATTTCTGGAAGCGTCTCT
CGGCCCAAAGGGCACAAAACTTTAGGGTTTCGAAAAAAGAATAAA
Right flanking sequence: Indices 146066 -- 146565
GTTGCTCGCGGTTCATCCATTCTAGGTGTTTGATGTTTTTGATGGCCTGCCCCAATTCTGTATAG
TACTTGAAGAAGGCTTTGTATTTTGAATGGATATCAACCCTTTTCCTACTATATTCTCCCGACGC
GAGGCGCATATTCGCTACATTGTATTTGGGTATGAGTATGTCTTCGACGTAGCAATCCAACTTAT
GTAGGAAGATATTGGTACAAAGCGGGGATATTATAGAGCCCTGCGGAACGCCCTCTGTGTTGTAT
CCCGTTCGATCCGTAAGGTTATATACATCTATGTATCCTGCGTTAAGTAGCTTCCGCATAAGATC
CTGCAGTGCTTTAGATCGCAGTACTGGTCCCATCTCCTTAATAAGCAGGTCGTGATGAATCTTGT
CAAAGTCTTTCTTAATATCAATTTGTACAAGCCAAGTCGGTGCCGTCCACGAGTAACGTGGGTCT
CGCAGGGCTTCATGACAGCTTCTCCCGGGGCGGAACCCGTGGCTT
Found at i:162387 original size:32 final size:32
Alignment explanation
Indices: 162348--162444 Score: 194
Period size: 32 Copynumber: 3.0 Consensus size: 32
162338 TTGAATCGCT
162348 AAAATTTATATAAATGGATTCACTACAGCATA
1 AAAATTTATATAAATGGATTCACTACAGCATA
162380 AAAATTTATATAAATGGATTCACTACAGCATA
1 AAAATTTATATAAATGGATTCACTACAGCATA
162412 AAAATTTATATAAATGGATTCACTACAGCATA
1 AAAATTTATATAAATGGATTCACTACAGCATA
162444 A
1 A
162445 TTGGAGCCAC
Statistics
Matches: 65, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
32 65 1.00
ACGTcount: A:0.47, C:0.12, G:0.09, T:0.31
Consensus pattern (32 bp):
AAAATTTATATAAATGGATTCACTACAGCATA
Left flanking sequence: Indices 161848 -- 162347
CTATTCGTTACATGAAAGAAAGGTGAGGATCTAATAGGGGGGCTACTTGGTCCACGGGGAATAAC
CAAGTGACGGGGCCTCACTTTGACAATCGAGCCCGTAGGCTTGATTGGCGTAGTTCGGTGGCTTA
GTTCATGACAAAAAGCTTTCTGGGTACATGAAACACCAGGTCCTGTAAAATCTATTCTTTCTCAG
CAATTTCGGCGAAGTAAATCGTAGAGCCGGCCCGAAACCCAACAACCCCCGGAGCCAAAGAAGCA
CATAGTGCCTGTAGAGGCAAAGAAGTATCCTCCCCCGAATTAGCTGGTGAACGTGTAATGCGGGA
GCCGAACGACACAGTACCTAAAACCTTCTGCATAGGTAGCGCTGAGTTAGGCAGGGCCCAAGTCC
TAGCCTGGGATAGCAATGGGCAAATTTTTCAGTGGCTGAGACCGTACATAGTTGTACAAGGTACT
ATCCGTGTCTCACCATGAACCGCTCCGGACGGCAGTTGAATCGCT
Right flanking sequence: Indices 162445 -- 162944
TTGGAGCCACTGGGGTTGGTTCTCAGCGCCTCGTATCATTAATCTAGTCTTTATGGTAGCCTGGC
GCTACGCGAACAAAAAAAAAGATTTTTTTTGCTCTGCATCTTTCTAGCACTCCATGGGCAGGGCC
CTAAGGGGACTTTATTTTGTCGGACACCACAATATTGAAATACTGTCCGACAAAACAAAGGGCTA
AAGCCTTTCAGGCCGAAAGTCGGCGGCCTGATCGCAGCCTCTAAGCTCTCTGCCTTTTAAGGAAT
CCTCCGCAATTTCACAAAAAACTTTAGAGTATGGCCCACGAAAAAAGATATATTTGCGAAATATA
TCTTTTTTCTGCATAAATATTCAAGCTAAGGGATGAGGGCCGCAGGCAAAATGAAATATATATTT
TATGACAAAAGATTTAATTCTTTCGGCGAATAACGGGATTCGAACCCGTGTTTTCAGAGCCACAA
TCTGCAACTTTGACCCCTAAGTTATATCCGCCCCTATTTATAAAT
Done.