Specifications
==============

Sequence source file: "/mnt/biodata02/home/xyzhang/pmgdraw-test/test_set/outdir_mt2/NC_035977.1/NC_035977/Repetitive_sequence/123.misa.ini"

Definement of microsatellites (unit size / minimum number of repeats):
(1/10) (2/6) (3/5) (4/5) (5/5) (6/5) 

Maximal number of bases interrupting 2 SSRs in a compound microsatellite:  100



RESULTS OF MICROSATELLITE SEARCH
================================

Total number of sequences examined:              1
Total size of examined sequences (bp):           163057
Total number of identified SSRs:                 35
Number of SSR containing sequences:              1
Number of sequences containing more than 1 SSR:  1
Number of SSRs present in compound formation:    1


Distribution to different repeat type classes
---------------------------------------------

Unit size	Number of SSRs
1	24
2	10
4	1

Frequency of identified SSR motifs
----------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	total
A	-	-	-	-	-	7	5									12
C	-	-	-	-	-	1	3	1								5
G	-	-	-	-	-	1	1	1								3
T	-	-	-	-	-	3	1									4
AT	-	3				2					1				1	7
TA	-		1		2											3
AATA			1													1

Frequency of classified repeat types (considering sequence complementary)
-------------------------------------------------------------------------

Repeats	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	total
A/T	-	-	-	-	-	10	6									16
C/G	-	-	-	-	-	2	4	2								8
AT/AT	-	3	1		2	2					1				1	10
AAAT/ATTT			1													1