Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: JF920287
Parameters: 2 7 7 80 10 50 500
Length:  232241

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
85--165
39
2.1
39
97
0
153
44
11
14
29
1.80
2939--2969
13
2.4
13
94
0
53
9
25
29
35
1.88
7719--7805
36
2.4
36
94
1
149
28
16
26
28
1.97
21277--21455
71
2.5
71
99
0
349
30
15
21
32
1.94
25192--25218
12
2.2
12
100
0
54
22
37
29
11
1.89
95833--95913
39
2.1
39
97
0
153
44
11
14
29
1.80
98687--98717
13
2.4
13
94
0
53
9
25
29
35
1.88
103581--103629
22
2.2
22
96
0
89
36
20
20
22
1.95
110783--110807
12
2.1
12
100
0
50
28
24
16
32
1.96
124485--124523
17
2.3
17
95
0
69
35
23
0
41
1.55
130619--130660
18
2.4
18
84
11
52
28
33
14
23
1.94
133189--133218
15
2.0
15
100
0
60
40
20
20
20
1.92
180445--180518
27
2.7
28
95
2
132
14
16
24
44
1.85
195382--195413
15
2.1
15
94
0
55
0
28
3
68
1.04
216626--216682
21
2.7
21
100
0
114
15
10
19
54
1.70
218761--218807
23
2.0
23
83
8
58
42
25
19
12
1.86
226134--226197
26
2.4
27
89
2
103
32
18
28
20
1.96
226460--226513
19
2.8
20
86
10
78
31
22
20
25
1.98
226459--226520
19
3.3
19
81
2
72
30
25
17
25
1.97
232150--232188
19
2.1
19
100
0
78
33
10
20
35
1.86

Tables:   1

The End!