123.fas.2.7.7.80.10.50.500.1.html

Tandem Repeats Finder Program written by:

Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_002511
Parameters: 2 7 7 80 10 50 500
Length:  368801

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment

Table Explanation

Indices	Period Size	Copy Number	Consensus Size	Percent Matches	Percent Indels	Score	A	C	G	T	Entropy (0-2)
6140--6177	18	2.1	18	95	0	67	26	5	7	60	1.46
10550--10630	40	2.0	40	92	4	137	35	29	14	19	1.92
31979--32031	21	2.5	21	79	14	63	28	18	28	24	1.98
40582--40624	17	2.4	18	78	14	54	53	6	27	11	1.63
50668--50862	66	3.0	66	98	0	372	25	25	27	22	2.00
66629--66655	14	1.9	14	100	0	54	22	25	22	29	1.99
100094--100209	30	3.9	30	94	0	187	26	17	33	22	1.96
100535--100635	32	3.2	32	97	0	184	28	15	20	34	1.94
102666--102741	39	1.9	39	94	0	134	22	25	21	31	1.98
108360--108401	22	1.9	22	100	0	84	52	11	19	16	1.74
125240--125644	32	12.6	32	99	0	801	34	15	19	31	1.93
126989--127031	18	2.4	18	81	18	54	34	25	20	18	1.96
129947--130030	42	2.0	42	100	0	168	38	14	30	16	1.89
190256--190298	18	2.4	19	80	11	54	44	2	34	18	1.63
192353--192434	42	2.0	42	97	0	155	37	20	30	10	1.87
211175--211258	42	2.0	42	100	0	168	16	30	14	38	1.89
214174--214216	18	2.4	18	81	18	54	18	20	25	34	1.96
215561--215965	32	12.6	32	99	0	801	31	19	15	34	1.93
273289--273404	54	2.1	54	92	3	189	17	31	29	22	1.96
273456--273517	21	3.0	21	95	0	106	32	22	40	4	1.75
325007--325113	21	4.7	24	78	10	91	11	22	14	52	1.72
325027--325102	21	3.5	21	89	5	98	7	21	15	55	1.66
Indices	Period Size	Copy Number	Consensus Size	Percent Matches	Percent Indels	Score	A	C	G	T	Entropy (0-2)
329938--330057	33	3.6	33	98	0	231	25	31	18	25	1.97
335620--335645	12	2.2	12	100	0	52	15	34	15	34	1.89
347148--347231	42	2.0	42	100	0	168	16	30	14	38	1.89
350147--350189	18	2.4	18	81	18	54	18	20	25	34	1.96
351534--351938	32	12.6	32	99	0	801	31	19	15	34	1.93
361641--361673	17	2.0	17	88	5	50	45	9	18	27	1.79

Tables:   1

The End!