123.fas.2.7.7.80.10.50.500.1.html

Tandem Repeats Finder Program written by:

Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: FP885845
Parameters: 2 7 7 80 10 50 500
Length:  364950

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment

Table Explanation

Indices	Period Size	Copy Number	Consensus Size	Percent Matches	Percent Indels	Score	A	C	G	T	Entropy (0-2)
23223--23306	42	2.0	42	100	0	168	16	30	14	38	1.89
26222--26264	18	2.4	18	81	18	54	18	20	25	34	1.96
27609--27757	32	4.6	32	99	0	289	31	19	15	33	1.93
120199--120241	18	2.4	19	80	11	54	44	2	34	18	1.63
122297--122378	42	2.0	42	97	0	155	37	20	30	10	1.87
141126--141209	42	2.0	42	100	0	168	16	30	14	38	1.89
144125--144167	18	2.4	18	81	18	54	18	20	25	34	1.96
145512--145660	32	4.6	32	99	0	289	31	19	15	33	1.93
155365--155397	17	2.0	17	88	5	50	45	9	18	27	1.79
168669--168706	18	2.1	18	95	0	67	26	5	7	60	1.46
173081--173161	40	2.0	40	92	4	137	35	29	14	19	1.92
189136--189251	54	2.1	54	92	3	189	17	31	29	22	1.96
189306--189367	21	3.0	21	95	0	106	32	22	40	4	1.75
240880--240986	21	4.7	24	78	10	91	11	22	14	52	1.72
240900--240975	21	3.5	21	89	5	98	7	21	15	55	1.66
245811--245930	33	3.6	33	98	0	231	25	31	18	25	1.97
251495--251520	12	2.2	12	100	0	52	15	34	15	34	1.89
263022--263105	42	2.0	42	100	0	168	16	30	14	38	1.89
266021--266063	18	2.4	18	81	18	54	18	20	25	34	1.96
267408--267556	32	4.6	32	99	0	289	31	19	15	33	1.93
277261--277293	17	2.0	17	88	5	50	45	9	18	27	1.79
290053--290128	39	1.9	39	94	0	134	31	21	25	22	1.98
Indices	Period Size	Copy Number	Consensus Size	Percent Matches	Percent Indels	Score	A	C	G	T	Entropy (0-2)
292164--292264	32	3.2	32	98	0	193	33	21	15	28	1.95
292590--292705	30	3.9	30	94	0	187	22	33	17	26	1.96
323352--323388	18	2.1	18	89	0	56	21	37	8	32	1.83
326157--326183	14	1.9	14	100	0	54	29	22	25	22	1.99
341956--342150	66	3.0	66	98	0	372	22	27	25	25	2.00
352198--352240	17	2.4	18	78	14	54	11	27	6	53	1.63

Tables:   1

The End!