Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: FQ378026
Parameters: 2 7 7 80 10 50 500
Length:  385220

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12812--12895
42
2.0
42
100
0
168
16
30
14
38
1.89
15811--15853
18
2.4
18
81
18
54
18
20
25
34
1.96
17198--17378
32
5.6
32
99
0
353
31
19
15
33
1.93
128428--128498
28
2.5
28
81
9
81
29
18
26
25
1.98
130370--130493
30
4.3
30
91
4
184
32
12
5
50
1.63
141050--141133
42
2.0
42
100
0
168
16
30
14
38
1.89
144049--144091
18
2.4
18
81
18
54
18
20
25
34
1.96
145436--145616
32
5.6
32
99
0
353
31
19
15
33
1.93
155321--155353
17
2.0
17
88
5
50
45
9
18
27
1.79
168625--168662
18
2.1
18
95
0
67
26
5
7
60
1.46
189053--189168
54
2.1
54
92
3
189
17
31
29
22
1.96
189223--189284
21
3.0
21
95
0
106
32
22
40
4
1.75
240797--240903
21
4.7
24
78
10
91
11
22
14
52
1.72
240817--240892
21
3.5
21
89
5
98
7
21
15
55
1.66
245728--245847
33
3.6
33
98
0
231
25
31
18
25
1.97
251412--251437
12
2.2
12
100
0
52
15
34
15
34
1.89
262943--263026
42
2.0
42
100
0
168
16
30
14
38
1.89
265942--265984
18
2.4
18
81
18
54
18
20
25
34
1.96
267329--267509
32
5.6
32
99
0
353
31
19
15
33
1.93
277214--277246
17
2.0
17
88
5
50
45
9
18
27
1.79
284352--284393
22
1.9
22
100
0
84
16
19
11
52
1.74
290017--290092
39
1.9
39
94
0
134
31
21
25
22
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
292139--292227
32
2.8
32
98
0
169
33
16
16
32
1.92
292553--292668
30
3.9
30
94
0
187
22
33
17
26
1.96
323318--323354
18
2.1
18
89
0
56
21
37
8
32
1.83
326123--326149
14
1.9
14
100
0
54
29
22
25
22
1.99
341915--342109
66
3.0
66
98
0
372
22
27
25
25
2.00
352157--352199
17
2.4
18
78
14
54
11
27
6
53
1.63
378963--379005
18
2.4
19
80
11
54
44
2
34
18
1.63
381061--381142
42
2.0
42
97
0
155
37
20
30
10
1.87

Tables:   1

The End!