Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NC_024519
Parameters: 2 7 7 80 10 50 500
Length:  106198

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
997--1044
16
3.0
16
90
0
69
25
4
2
68
1.18
15902--15934
15
2.3
15
89
5
50
9
12
0
78
0.95
18742--18784
19
2.2
20
83
4
52
34
20
13
30
1.92
26046--26103
19
3.1
18
92
7
89
29
0
0
70
0.87
26045--26104
20
3.0
20
100
0
120
30
0
0
70
0.88
26045--26107
22
2.9
22
90
2
101
28
0
0
71
0.86
29188--29212
12
2.1
12
100
0
50
40
0
0
60
0.97
41168--41317
81
1.9
81
92
2
257
28
24
18
28
1.98
41766--41807
2
21.0
2
100
0
84
50
0
0
50
1.00
72091--72171
40
2.0
40
100
0
162
29
7
16
46
1.73
105671--105729
11
5.7
11
74
22
65
22
20
15
42
1.89
105662--105727
29
2.3
29
94
5
116
24
18
16
40
1.90
105711--105816
52
2.0
52
96
0
194
39
20
16
23
1.92
105836--105914
27
2.9
27
88
7
117
24
20
12
43
1.86
105848--105879
16
2.0
16
93
0
55
28
15
12
43
1.83
105825--105863
11
3.5
11
92
0
69
25
20
10
43
1.83
105889--105920
11
2.9
11
95
0
55
21
18
15
43
1.87
105874--105905
16
2.0
16
100
0
64
25
18
12
43
1.85
106147--106182
18
2.0
18
100
0
72
33
5
16
44
1.71
106128--106163
12
3.0
12
100
0
72
33
8
8
50
1.63

Tables:   1

The End!