Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NC_054354
Parameters: 2 7 7 80 10 50 500
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 500
Length: 341829
ACGTcount: A:0.28, C:0.22, G:0.23, T:0.27
Found at i:7116 original size:24 final size:22
Alignment explanation
Indices: 7084--7131 Score: 69
Period size: 24 Copynumber: 2.1 Consensus size: 22
7074 ATCGCTAACT
*
7084 AATACTAATCTTAATATAATAGAA
1 AATACTAATC-TAATAGAA-AGAA
7108 AATACTAATCTAATAGAAAGAA
1 AATACTAATCTAATAGAAAGAA
7130 AA
1 AA
7132 GAACTGTCTT
Statistics
Matches: 23, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
22 6 0.26
23 7 0.30
24 10 0.43
ACGTcount: A:0.58, C:0.08, G:0.06, T:0.27
Consensus pattern (22 bp):
AATACTAATCTAATAGAAAGAA
Left flanking sequence: Indices 6584 -- 7083
TTTCCGAAGGAACTGGAGTTACATCTCTTTTCCAGTTCCATTCAAGAGTTCTTATGGATTTCCAC
GACCCTCTAAGACCCCGAAATTTTGACAAATTCCTTTTCTTTTTCTTAGGAACACATACAAGATT
CGTCACTATAAATATAAAAAGGGTAATGGTAATCCCACGATTAATTACTTCATTTATGAATTTCA
TAGTAATAGAAATACATATCCTGCCGAAACAGAATTTGTAATTTGCTATCCTCTTGCCTAGCGGG
CAAAGGCAAAGATTGACCTCCGTGGAAAAGATGATTCATTCGGATCAGCATGAAAGCCCAACTAC
ATTGCATTGCCAGAATCCATGTTGTATATTTGACAGAGGTTGACCCCCCCTCTCTCATGGTACAA
TCCTCTTCCCGCCGAGCCTCCTTTCTCCTCGGTCCACAGAGACAAAATGTGGGACTGGCGCCAAC
AGTTAATCACGGAAGAAAGGACTCACTGAGCCGGGATCGCTAACT
Right flanking sequence: Indices 7132 -- 7631
GAACTGTCTTTTCTGTATACTTATGTATACTTTCCCCGGTTCTGCTGCTACCGCGGGCTTTACGC
AATCGATCGGATCATATAGATATCCCTTCAACACAACATAGGTCGTCGAAAGGATCTCGGAGACC
CACCAAAGCACGAAAGCCAGGATCTTTCAGAAAATGGATTCCTATTCGAAGAATGCATAACCGCA
TGGATAAGCTCACACTAACCCGTCAATTTTGGATCCAATTCGGGATTTTCCTTGGGAGGTATCAG
TAAGGAGAATGGAATAATATTGATTCATATAGATACAGAGGAAAAGGTTCTCTATTGATTCAAAT
GCTCTACCTATGGGATAGGGATAGAGAAAGAGGAAAAAACCGATCACATATTTGATCGAAAAATC
AATCTGATTGATTTCGTACCCCTCGCTCAATGAGAAAATGGGTCAGATTCTATAGGATCAAACCT
ATGAGACTTAAGGAATGACGGAAGGGAATAAAATCAAAAAAAGAA
Found at i:7640 original size:12 final size:13
Alignment explanation
Indices: 7617--7641 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
7607 GAAGGGAATA
7617 AAATCAAAAAAAG
1 AAATCAAAAAAAG
7630 AAATCAAAAAAA
1 AAATCAAAAAAA
7642 CGAGGGGAAA
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.80, C:0.08, G:0.04, T:0.08
Consensus pattern (13 bp):
AAATCAAAAAAAG
Left flanking sequence: Indices 7117 -- 7616
CTAATAGAAAGAAAAGAACTGTCTTTTCTGTATACTTATGTATACTTTCCCCGGTTCTGCTGCTA
CCGCGGGCTTTACGCAATCGATCGGATCATATAGATATCCCTTCAACACAACATAGGTCGTCGAA
AGGATCTCGGAGACCCACCAAAGCACGAAAGCCAGGATCTTTCAGAAAATGGATTCCTATTCGAA
GAATGCATAACCGCATGGATAAGCTCACACTAACCCGTCAATTTTGGATCCAATTCGGGATTTTC
CTTGGGAGGTATCAGTAAGGAGAATGGAATAATATTGATTCATATAGATACAGAGGAAAAGGTTC
TCTATTGATTCAAATGCTCTACCTATGGGATAGGGATAGAGAAAGAGGAAAAAACCGATCACATA
TTTGATCGAAAAATCAATCTGATTGATTTCGTACCCCTCGCTCAATGAGAAAATGGGTCAGATTC
TATAGGATCAAACCTATGAGACTTAAGGAATGACGGAAGGGAATA
Right flanking sequence: Indices 7642 -- 8141
CGAGGGGAAAAAAATAATAAAAAGAAATAAGTAAATAAAAATGAAGTATAAGAACCCAGATTCCA
AATGAACAAATTCAAACTTGAAAAGGATCTTTCTGATTCTCGAAGAATGAGGGGCAAGGGGATTG
ATCGAGAAAGATCTCTTGTTCTTATTATAAGATCGTGTGATTGGATCCGCGGATGTTTGGTAAAA
AAAATCTTCTCTTTTGAGAATAATCAAAAATGAAAAGTGTTCAATTGGAACATGAAAACGTGACT
GAATTTGTCCTAGTTACTCTTCGGGACGGAGTGGAAGAGGGGAGGAGATTCTCGAACGAGGAAGA
GGACCCAATGACTTCGAAAGAATTGAACGAGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTC
TGTAGAGTGGCAGTAAGGGTGACTTATCTGTCAACTTTTCCACTATCAACCCCAAAAAACCAAAC
TCTGCCTTACGTAAAGTTGCCAGAGTACGATTAACCTCTGGGTTT
Found at i:14036 original size:18 final size:18
Alignment explanation
Indices: 14013--14071 Score: 118
Period size: 18 Copynumber: 3.3 Consensus size: 18
14003 AGAACTCCGA
14013 ATCCTTCTCTTGAAGCTC
1 ATCCTTCTCTTGAAGCTC
14031 ATCCTTCTCTTGAAGCTC
1 ATCCTTCTCTTGAAGCTC
14049 ATCCTTCTCTTGAAGCTC
1 ATCCTTCTCTTGAAGCTC
14067 ATCCT
1 ATCCT
14072 CCTCATCATC
Statistics
Matches: 41, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
18 41 1.00
ACGTcount: A:0.17, C:0.34, G:0.10, T:0.39
Consensus pattern (18 bp):
ATCCTTCTCTTGAAGCTC
Left flanking sequence: Indices 13513 -- 14012
AGTAATGGGAAACCCTTCTCCTGTTACATGAATCCAATTTTCATTTCATCCGGGAAAAGCCATCT
TTTTCTCAACAATGTCTTTGCCATTTGATCCAATAGCCTTCCGTTAGATAGGAACAGATTTGATA
AATACTGATAACTCTCAGATGGAGTATTAGAACGGGAAAATCCAAATGAACTATTGGCTCTAAGC
CATCTCTGGCGATGAATCAAGAATTCGAAGTGCTTTTCTTTCCTATTCTTGATAAACCAGCTTTG
AGATAGAGATGTAATAGGATCTTGGGAAATAAAAACAATAAGCCCCTTTAACATCTCTTCATCTT
CATCTGCAAAGAATTCTCGATGTAAAAACACAGAGACAGAGGGCTCATCTTGGAATAGGAAAAAG
AGTGGATCCGGGGGGTCCCAAATGAATCGGCTTATTCGAAAAAAGCCTTGTTCTTTGGAAGATCT
AGCTCGTGCCTGGTACTGCATGGTTCCACTCTGCAAGAACTCCGA
Right flanking sequence: Indices 14072 -- 14571
CCTCATCATCAATGAGCCCCCGCCCGGCCCAATAGGGAAATCCCAAATCATCGGGCCTTTCGATA
CAATCAAATAGAAAGCCCCAAGGGCGCCATATTCTAGGAGCCCAATCTATGTGATCGAAGAAATC
CTCCTCTATTTCCCCTTCTTCAACCTCCGATTCGTATTTTTGATAGAGAAATCTCTGATCAACGA
TAGAACGAGATCCATTTTGTATCATATATAAGGGATTCCTTGGTTCGGGCCGAAGAAGGAATGTC
ACTCGATCATTATCAAACTGACTGTAATCTCTTTCTGTCCGCGAGTATACCATCAGAGCGCCTTC
TATTTCTACTAGGCCATGAACTAGATCAGAATCATTCTCAACGAACCGATAAGAAGCGATCCTAT
TTTTTTCATCGGGTCCGGGTAGAGACCAAAGGTCTTGAGCGACCGATCCGGCAGAACAACTCAAA
AGATAAAGAAGTATCGTTAATTTCTTCATGCTCGTTCCAAGTTCG
Found at i:69147 original size:150 final size:150
Alignment explanation
Indices: 68876--69175 Score: 600
Period size: 150 Copynumber: 2.0 Consensus size: 150
68866 CCGCATAGTT
68876 ACCGATTCTGCGCAGTAAGCAAGGTACTTCGCTGTCCCGAAATAGATAAAGGTAGGGTAGGCAAC
1 ACCGATTCTGCGCAGTAAGCAAGGTACTTCGCTGTCCCGAAATAGATAAAGGTAGGGTAGGCAAC
68941 AAGTGTAGGTGACCTACATAATAATCCAGAATTTCTAATTCGAGAGATTTGATACTTAATCATTT
66 AAGTGTAGGTGACCTACATAATAATCCAGAATTTCTAATTCGAGAGATTTGATACTTAATCATTT
69006 CAGTCAGTAGTAGAGAAGCA
131 CAGTCAGTAGTAGAGAAGCA
69026 ACCGATTCTGCGCAGTAAGCAAGGTACTTCGCTGTCCCGAAATAGATAAAGGTAGGGTAGGCAAC
1 ACCGATTCTGCGCAGTAAGCAAGGTACTTCGCTGTCCCGAAATAGATAAAGGTAGGGTAGGCAAC
69091 AAGTGTAGGTGACCTACATAATAATCCAGAATTTCTAATTCGAGAGATTTGATACTTAATCATTT
66 AAGTGTAGGTGACCTACATAATAATCCAGAATTTCTAATTCGAGAGATTTGATACTTAATCATTT
69156 CAGTCAGTAGTAGAGAAGCA
131 CAGTCAGTAGTAGAGAAGCA
69176 GTGGCTCCGG
Statistics
Matches: 150, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
150 150 1.00
ACGTcount: A:0.34, C:0.17, G:0.23, T:0.26
Consensus pattern (150 bp):
ACCGATTCTGCGCAGTAAGCAAGGTACTTCGCTGTCCCGAAATAGATAAAGGTAGGGTAGGCAAC
AAGTGTAGGTGACCTACATAATAATCCAGAATTTCTAATTCGAGAGATTTGATACTTAATCATTT
CAGTCAGTAGTAGAGAAGCA
Left flanking sequence: Indices 68376 -- 68875
TGCTGCTCCTGAGCGCGCCCACTGGGTCCCGCATGACTTCGTTCGTCAGTTTTTCATTGCATACC
TGCTGAAAGCCGGGTGAGACATTTGCTGTAAAAGCCTTGACACGTGCGACCGTCTCAGGGTTTAT
GATGTCATATACATTATAACACTCTGAGGATAGCATAATACTAGGTATTAACCCATACCAGACAT
GAAAGCCTAAGCAGATAGCATAATTCATTGCATCCGTAGTTGCTATTACATTATCAACATACTTG
GATACAACCTCGTACTTATTATTCCTTCTCCATATTAGGTTTGAGAAGCCCTCATAAATAGGTTG
GTAGGTCCTATTTCGTACTTTACGATCAATACGACTCCTCAATTCGTGTTCCCGAATTCTTTGCC
TGTGCTCTAAATTCAAGAGTTGTTCATAAACACCACATGCATACTTACTAGAGAGAATAGTTCTA
AATATGGGTGGGAATTGCCTCCTCAGGATGACTCGCCGCATAGTT
Right flanking sequence: Indices 69176 -- 69675
GTGGCTCCGGGAAGGAGACTTGCCTTATCAGATGCGGGTGTTGATGCGGTAGATGAGGTCTTTGC
TTTTCCAGTTAGAGAATGAGTTGTTAGCCTTACATAATGCGCTGCACATCTATCATTCTATAGTA
ATGTCGGCTCTCCCGCTATTGGTGGTTTAGTATATATAATATAATTAGGGATTCATTAAGATTCT
CAACTTGTTAAAGATAGATTCTTTTTTTTTAGGCGAGGCGAGCCGATAGGATGAACTAAAATAAA
AGGGGTTCTGTGCCGTGAACTTTGTATCGCGCACATCACTTAGAAGGAAGAGAAAAGAGAATCCA
ATTTTTTTCTTTCACTACATATATAATATAATAGACTCTTTACTAATCTATAAAATAGAAAAGAA
CTTCTATAAAATAGAAAATAACTACAAAATAGAAAAAGGTACATTTACAGACACCCAGAGGGATA
ACTATGTATTATGTTGATCCATATCAATGAATTTGTAGAATAGAT
Found at i:69573 original size:21 final size:21
Alignment explanation
Indices: 69547--69588 Score: 75
Period size: 21 Copynumber: 2.0 Consensus size: 21
69537 TCTTTACTAA
69547 TCTATAAAATAGAAAAGAACT
1 TCTATAAAATAGAAAAGAACT
*
69568 TCTATAAAATAGAAAATAACT
1 TCTATAAAATAGAAAAGAACT
69589 ACAAAATAGA
Statistics
Matches: 20, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
21 20 1.00
ACGTcount: A:0.57, C:0.10, G:0.07, T:0.26
Consensus pattern (21 bp):
TCTATAAAATAGAAAAGAACT
Left flanking sequence: Indices 69047 -- 69546
AGGTACTTCGCTGTCCCGAAATAGATAAAGGTAGGGTAGGCAACAAGTGTAGGTGACCTACATAA
TAATCCAGAATTTCTAATTCGAGAGATTTGATACTTAATCATTTCAGTCAGTAGTAGAGAAGCAG
TGGCTCCGGGAAGGAGACTTGCCTTATCAGATGCGGGTGTTGATGCGGTAGATGAGGTCTTTGCT
TTTCCAGTTAGAGAATGAGTTGTTAGCCTTACATAATGCGCTGCACATCTATCATTCTATAGTAA
TGTCGGCTCTCCCGCTATTGGTGGTTTAGTATATATAATATAATTAGGGATTCATTAAGATTCTC
AACTTGTTAAAGATAGATTCTTTTTTTTTAGGCGAGGCGAGCCGATAGGATGAACTAAAATAAAA
GGGGTTCTGTGCCGTGAACTTTGTATCGCGCACATCACTTAGAAGGAAGAGAAAAGAGAATCCAA
TTTTTTTCTTTCACTACATATATAATATAATAGACTCTTTACTAA
Right flanking sequence: Indices 69589 -- 70088
ACAAAATAGAAAAAGGTACATTTACAGACACCCAGAGGGATAACTATGTATTATGTTGATCCATA
TCAATGAATTTGTAGAATAGATCCTCATATGAATTAATCATATGTCGAGAACCAGATTTGAACTG
GTGACACGAGGATTTTCAGTCCTCTGCTCTACCAGCTGAGCTATCCCGACCATTACCAAGACATC
ATCCTCATTTTTATAGAGGACTTGTGTCTATGTCAATTAAAAATGAAAAAAGAAAAAGCCCCCTA
TCGGATTTGAACCGATGACTTACGCCTTACCATGGCGTTACTCTACCACTGAGTTAAAAGGGCCA
TTTGATTCAATTACTGAATGAATCGCTAGACGTATAAAATATATATATATAAATATATATATATA
TAAGTATATGCAGTAGACTCGTAGTATCTACTAGCTTATTCAGAAATGCGATTCTAATTTACTTA
ATTTAATTAATAAATAGGGTCGAATTGGTTTATTGATATTGGATT
Found at i:69969 original size:14 final size:14
Alignment explanation
Indices: 69946--69978 Score: 59
Period size: 14 Copynumber: 2.4 Consensus size: 14
69936 TCGCTAGACG
69946 TATA-AAATATATA
1 TATATAAATATATA
69959 TATATAAATATATA
1 TATATAAATATATA
69973 TATATA
1 TATATA
69979 TAAGTATATG
Statistics
Matches: 19, Mismatches: 0, Indels: 1
0.95 0.00 0.05
Matches are distributed among these distances:
13 4 0.21
14 15 0.79
ACGTcount: A:0.58, C:0.00, G:0.00, T:0.42
Consensus pattern (14 bp):
TATATAAATATATA
Left flanking sequence: Indices 69446 -- 69945
TGCCGTGAACTTTGTATCGCGCACATCACTTAGAAGGAAGAGAAAAGAGAATCCAATTTTTTTCT
TTCACTACATATATAATATAATAGACTCTTTACTAATCTATAAAATAGAAAAGAACTTCTATAAA
ATAGAAAATAACTACAAAATAGAAAAAGGTACATTTACAGACACCCAGAGGGATAACTATGTATT
ATGTTGATCCATATCAATGAATTTGTAGAATAGATCCTCATATGAATTAATCATATGTCGAGAAC
CAGATTTGAACTGGTGACACGAGGATTTTCAGTCCTCTGCTCTACCAGCTGAGCTATCCCGACCA
TTACCAAGACATCATCCTCATTTTTATAGAGGACTTGTGTCTATGTCAATTAAAAATGAAAAAAG
AAAAAGCCCCCTATCGGATTTGAACCGATGACTTACGCCTTACCATGGCGTTACTCTACCACTGA
GTTAAAAGGGCCATTTGATTCAATTACTGAATGAATCGCTAGACG
Right flanking sequence: Indices 69979 -- 70478
TAAGTATATGCAGTAGACTCGTAGTATCTACTAGCTTATTCAGAAATGCGATTCTAATTTACTTA
ATTTAATTAATAAATAGGGTCGAATTGGTTTATTGATATTGGATTTGATAAATATCAATGCAATG
AATTGTTTCAAGACTGACCATAATTGTTCCATCAGAACGAAATTCAGTTGATTGATATATGTACC
TTAGCAATTTGACAGAGATCCGAGCTATTTTATCAAAATATGTAATGAAGAGATTTGATTTGTCC
CTCAACCAAACTTTTTTTATAAAAAACACACACATTTTTTGATTTTTCTGTTTATGTCAGACCAA
TCACTTACCTAAAGAATCCTATACTTTGTATTATTTAATAGAATTTTCTAAGAGAATATAATTCT
ATCAATTTCTCATTTTTTTTATAGAATATATTTCTAGATATAATAGAGTGACGATGAAAATGAAT
GATTCATGAGTCTAAATCACGAATCAAAAATGGAATCATAAAAGA
Found at i:69973 original size:16 final size:16
Alignment explanation
Indices: 69946--69987 Score: 68
Period size: 16 Copynumber: 2.7 Consensus size: 16
69936 TCGCTAGACG
69946 TATAAA-ATATATATA
1 TATAAATATATATATA
69961 TATAAATATATATATA
1 TATAAATATATATATA
*
69977 TATAAGTATAT
1 TATAAATATAT
69988 GCAGTAGACT
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
15 6 0.24
16 19 0.76
ACGTcount: A:0.55, C:0.00, G:0.02, T:0.43
Consensus pattern (16 bp):
TATAAATATATATATA
Left flanking sequence: Indices 69446 -- 69945
TGCCGTGAACTTTGTATCGCGCACATCACTTAGAAGGAAGAGAAAAGAGAATCCAATTTTTTTCT
TTCACTACATATATAATATAATAGACTCTTTACTAATCTATAAAATAGAAAAGAACTTCTATAAA
ATAGAAAATAACTACAAAATAGAAAAAGGTACATTTACAGACACCCAGAGGGATAACTATGTATT
ATGTTGATCCATATCAATGAATTTGTAGAATAGATCCTCATATGAATTAATCATATGTCGAGAAC
CAGATTTGAACTGGTGACACGAGGATTTTCAGTCCTCTGCTCTACCAGCTGAGCTATCCCGACCA
TTACCAAGACATCATCCTCATTTTTATAGAGGACTTGTGTCTATGTCAATTAAAAATGAAAAAAG
AAAAAGCCCCCTATCGGATTTGAACCGATGACTTACGCCTTACCATGGCGTTACTCTACCACTGA
GTTAAAAGGGCCATTTGATTCAATTACTGAATGAATCGCTAGACG
Right flanking sequence: Indices 69988 -- 70487
GCAGTAGACTCGTAGTATCTACTAGCTTATTCAGAAATGCGATTCTAATTTACTTAATTTAATTA
ATAAATAGGGTCGAATTGGTTTATTGATATTGGATTTGATAAATATCAATGCAATGAATTGTTTC
AAGACTGACCATAATTGTTCCATCAGAACGAAATTCAGTTGATTGATATATGTACCTTAGCAATT
TGACAGAGATCCGAGCTATTTTATCAAAATATGTAATGAAGAGATTTGATTTGTCCCTCAACCAA
ACTTTTTTTATAAAAAACACACACATTTTTTGATTTTTCTGTTTATGTCAGACCAATCACTTACC
TAAAGAATCCTATACTTTGTATTATTTAATAGAATTTTCTAAGAGAATATAATTCTATCAATTTC
TCATTTTTTTTATAGAATATATTTCTAGATATAATAGAGTGACGATGAAAATGAATGATTCATGA
GTCTAAATCACGAATCAAAAATGGAATCATAAAAGATGGAAAAGG
Found at i:121084 original size:18 final size:18
Alignment explanation
Indices: 121044--121086 Score: 54
Period size: 18 Copynumber: 2.4 Consensus size: 18
121034 ACCGCCCTGC
121044 CATAGTCGCGAGTCTGTTT
1 CATAGTCGCGAG-CTGTTT
121063 -ATAGTCGCGA-CTGTTGT
1 CATAGTCGCGAGCTGTT-T
121080 CATAGTC
1 CATAGTC
121087 AACAAGGTTG
Statistics
Matches: 22, Mismatches: 0, Indels: 5
0.81 0.00 0.19
Matches are distributed among these distances:
16 5 0.23
17 1 0.05
18 16 0.73
ACGTcount: A:0.19, C:0.21, G:0.26, T:0.35
Consensus pattern (18 bp):
CATAGTCGCGAGCTGTTT
Left flanking sequence: Indices 120544 -- 121043
GGGCTGCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTACAGAACCATGCCTGTCT
GTTGGAGCGAATTGGATGATCGGGCCGAGGGCTGCCCCCTCTTCCCCTCACTCTCCTTTCCCTAA
TATGAACCTTGAGTCATCAAAGCCTTTCTGACTCGGCCTGGCCCGGTCGCCCTACGCGACTGGCG
CTTCAAAAGGCGAAACTCTCGTCGTAGTTTGGCGGACACTTTTTTTTATCTAAAGGCGAAGACTC
TGAAGTGGGCGAACACTCGGCCCAGCGGGCGAACATGCCGGGCTCCGGCTCCGCGCACCTGCTGA
CACCTTTCGAAGCACTTTTGAGTGTGCGCTTTAGTTTTAGAATGTTTCGTTCAGCCTCACGAGTC
TACAAGCCTTTCTCATTTAAGTGCTCGCCTTTTGAATGGAATCTTCAGTAGGGGCCTTTAGTCTT
TTGATTAGAGTAGGGGTCGCGAGAGAGCAGAGCGTACCGCCCTGC
Right flanking sequence: Indices 121087 -- 121586
AACAAGGTTGAAACTTCCAGGAAAAAACTTCGAATTGGGAGGGCGATCCTCCCGGTGAACTGACC
GTACCCCAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAA
GGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCTCTCCTATCTTTTGATTAGGAA
AGCGGCACATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACAC
GATGTATAGAGTCTGACACCTGCCCGGTGCTGGAAAGTAAAAAGGAGAAGTGTTATAAGCTTTGA
ATGGAAGCCCCGGTAAACGGCGGCAGTAACTCTAACTGTCCTAAGGTAGCGAAATTCCTTGTCGC
ATAAGTAGCGACCTGCACGAATGGTGTAACGACTGCCCCGCTGTCTCCGACATGGACCCGGTGAA
ATTGAATTCTCCGTGAAGATGCGGAGTACCAACGGCTAGACGGTA
Found at i:123304 original size:150 final size:150
Alignment explanation
Indices: 123033--123333 Score: 602
Period size: 150 Copynumber: 2.0 Consensus size: 150
123023 GCAGGCTAAG
123033 AAAGAAAAGACTTAAAGTCACCAACTTGTCCACTCGCACTGCACCGTAACGGTGCCTTAGACCCC
1 AAAGAAAAGACTTAAAGTCACCAACTTGTCCACTCGCACTGCACCGTAACGGTGCCTTAGACCCC
123098 TATTGAAAAAAAGTAGATGGATGCCATCAGAAGATGGAATTTATAGTCGTCCACCATCTACCAAA
66 TATTGAAAAAAAGTAGATGGATGCCATCAGAAGATGGAATTTATAGTCGTCCACCATCTACCAAA
123163 AAATAAAAAAAAAAAAGAAA
131 AAATAAAAAAAAAAAAGAAA
123183 AAAGAAAAGACTTAAAGTCACCAACTTGTCCACTCGCACTGCACCGTAACGGTGCCTTAGACCCC
1 AAAGAAAAGACTTAAAGTCACCAACTTGTCCACTCGCACTGCACCGTAACGGTGCCTTAGACCCC
123248 TATTGAAAAAAAGTAGATGGATGCCATCAGAAGATGGAATTTATAGTCGTCCACCATCTACCAAA
66 TATTGAAAAAAAGTAGATGGATGCCATCAGAAGATGGAATTTATAGTCGTCCACCATCTACCAAA
123313 AAATAAAAAAAAAAAAGAAA
131 AAATAAAAAAAAAAAAGAAA
123333 A
1 A
123334 GCGTTATCAG
Statistics
Matches: 151, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
150 151 1.00
ACGTcount: A:0.44, C:0.21, G:0.16, T:0.19
Consensus pattern (150 bp):
AAAGAAAAGACTTAAAGTCACCAACTTGTCCACTCGCACTGCACCGTAACGGTGCCTTAGACCCC
TATTGAAAAAAAGTAGATGGATGCCATCAGAAGATGGAATTTATAGTCGTCCACCATCTACCAAA
AAATAAAAAAAAAAAAGAAA
Left flanking sequence: Indices 122533 -- 123032
CTCGAAGACTTCATTTTGCTGCGTCAGCAAGCTGAAAGAAAAAGCCCTTTCTCCTTTTTCATAAT
AAGAAGGTCAGCTCCAACCTATACAAGGCCGCCGCTTACTAAGCGCTGGTTCTATCCCGAAACGG
CCAAGCGGGGGGTGGGAATATTGAAAGAAAGAGAAGGGGAAGAAGCGGGGTAGAGGAATTGGTCA
ACTCATCAGGCTCATGACCTGAAGACTGCAGGTTCGAATCCTGTCCCCGCCTAAGAAAAAAAAAG
TCCTATGATCATGGCAAACGAGTTCCAGCAAGAAAACGGATGCGCGGCTAACGCTTTAGTACGAA
GTCACGAGATTTAACGAGCGAAATACTTGTAGCGAGTACCCAAGTACGAGGGCTTTTGCGCTAGT
GCCCTTGCTGGATGAAAGGAGTAGGCAAAGAAGCTTTGACTTCCTACGGAAGCTTCTTGAGTGAT
AAAGAAGATGAAAGCCTGTATTGCTTGGTCAGCAAGCAGGCTAAG
Right flanking sequence: Indices 123334 -- 123833
GCGTTATCAGATTGGGATCAATGACTTAAGCCTCTTTCTTAAGGGCGAACTGATCGACTTGCATG
TGTTAAGCATATAGTTTCAGTAGCATGATTGGACCATCCTCTTTCTCTTACTTAGATAGAGGAGA
GAGCACGTAAGACTTTCTACGCTACGATCTTTCTTCTCTTATGAGAGTTTTAGTTAGAGAGAAAA
AATGAATACGGCTGTTATATTATATACGATACCATTCGCCATGGATGATACGATTCAAAGAGATA
AGACCCTCAGACGCACATCTATCTAACATAGCAAAGCAAGAAAGAGGCAGGAAAGTTTGATTTTC
AACCGGTATAGGTATAAATGGAATTGAGAGATGGGATTCCAGGCTAAGGTTTTAGCCCATAGGGA
CTTGATGCATCGAATGCCCGGAAAGAATACGCTCTTGTCGCAATTGAATCAATAGTTAACCCACG
CACAGAATAGGCAGCTTGAGAAGAAGCTCTAAGCCTTGACGCTCT
Found at i:221411 original size:15 final size:15
Alignment explanation
Indices: 221391--221420 Score: 51
Period size: 15 Copynumber: 2.0 Consensus size: 15
221381 GTCCTCTTTA
221391 GCTTGAGCAGTCCAC
1 GCTTGAGCAGTCCAC
*
221406 GCTTGAGTAGTCCAC
1 GCTTGAGCAGTCCAC
221421 AGGCTTGCCG
Statistics
Matches: 14, Mismatches: 1, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
15 14 1.00
ACGTcount: A:0.20, C:0.30, G:0.27, T:0.23
Consensus pattern (15 bp):
GCTTGAGCAGTCCAC
Left flanking sequence: Indices 220891 -- 221390
ATATAAGATCGGATGAGGCCTATTATGTGCACTAATGACTCTTTCTGAGTCAAACTTTCATGTGG
CAGTCCATAGGATTATGAGCCTTTCACTTCTATTCGCCAAGGAGAGCACCAAGAAACATAAAATA
TCAATCAAATAAAGCAAGGCACACCCTTCTCTCCGACTCTGATTAGTTACATAGAGAAGAAGATT
TTTTCCATTTCGCATAGACCTTTTTTGTTCACGTCTTTGCTACGAGCGTGGGATATGGCAAGGCT
GAGCATTGACCATGGCAAGTGAAGGGATTGACTAAGCCAATCATGAATGACCACCTATTCGGGGG
TTTCCGCTTTTTGGCTGGCTTGGCGCATGAGGATACAAAGGGATTGGGTACTAAACTCTGTCTGT
GGTGAGTCGAGGCATATGATCCTAGGACCAGACTTCGCATGCTCTTCATTCAATCTGATCTTCTT
TTCTAGGGATGGCTGCCTCTACTTTCAGTAAAGAGGTCCTCTTTA
Right flanking sequence: Indices 221421 -- 221920
AGGCTTGCCGGCGAACCCTTTGACTTTAGGTTGAGTCAAGCCACTTTGTCTCTTTTGTCTTGCTT
TTTCTGTTTTGAAAATGCTGATAGATTCGTTTTCATGTCTCTTTCCCGTACGTTGGATTTCGAGC
GAGACAAGTCACACACTGGTCTATCAATCCACCAACACGGTATCGGGGCCAACCTCTGCGTGTGT
GTTCTCCCGGCAGGAGTAAACAGGCCCGCTAAAGCAGCCATTGTGAAAGATACAGAGCCTGGTGA
GTAGTTTGAAAGTCATGATACCTTTATTGATCTTTATTCAAAATAAGGCCTATCGGGAGATGTAA
AGTGAAGTGACTCACTCTCCCCTTCCCGGAGTCTCTTGTTCACACGTTGGGGCTAATGAGGCAGT
GGAAGCAGCTAGTTCACTATCGACATTAGGCTCGCAGAGCAGAACGTCGGCGAGGCGGGTAGGTT
GAGTGCAAAGAAAAAAGAAAGAGAAAGGAGACCAGCACACTCACT
Found at i:225225 original size:18 final size:18
Alignment explanation
Indices: 225204--225246 Score: 54
Period size: 18 Copynumber: 2.4 Consensus size: 18
225194 CAACCTTGTT
225204 GACTATGACAACAG-TCGC
1 GACTATGA-AACAGATCGC
225222 GACTAT-AAACAGACTCGC
1 GACTATGAAACAGA-TCGC
225240 GACTATG
1 GACTATG
225247 GCAGGGCGGT
Statistics
Matches: 22, Mismatches: 0, Indels: 5
0.81 0.00 0.19
Matches are distributed among these distances:
16 5 0.23
17 1 0.05
18 16 0.73
ACGTcount: A:0.35, C:0.26, G:0.21, T:0.19
Consensus pattern (18 bp):
GACTATGAAACAGATCGC
Left flanking sequence: Indices 224704 -- 225203
TACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGA
GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTAC
CTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCCATTCAAAGCTTATAACACTTCT
CCTTTTTACTTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCACTTAGCAGAGT
CCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAATCAAAAGATAGGA
GAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTCTCAAG
CGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGGGTACGGTCAGTTCACCGGGAGGAT
CGCCCTCCCAATTCGAAGTTTTTTCCTGGAAGTTTCAACCTTGTT
Right flanking sequence: Indices 225247 -- 225746
GCAGGGCGGTACGCTCTGCTCTCTCGCGACCCCTACTCTAATCAAAAGACTAAAGGCCCCTACTG
AAGATTCCATTCAAAAGGCGAGCACTTAAATGAGAAAGGCTTGTAGACTCGTGAGGCTGAACGAA
ACATTCTAAAACTAAAGCGCACACTCAAAAGTGCTTCGAAAGGTGTCAGCAGGTGCGCGGAGCCG
GAGCCCGGCATGTTCGCCCGCTGGGCCGAGTGTTCGCCCACTTCAGAGTCTTCGCCTTTAGATAA
AAAAAAGTGTCCGCCAAACTACGACGAGAGTTTCGCCTTTTGAAGCGCCAGTCGCGTAGGGCGAC
CGGGCCAGGCCGAGTCAGAAAGGCTTTGATGACTCAAGGTTCATATTAGGGAAAGGAGAGTGAGG
GGAAGAGGGGGCAGCCCTCGGCCCGATCATCCAATTCGCTCCAACAGACAGGCATGGTTCTGTAG
TCAAAGCAACTTCGTCACTTTCGTGTACCCATCGGACGGCAGCCC
Found at i:276328 original size:16 final size:16
Alignment explanation
Indices: 276303--276344 Score: 68
Period size: 16 Copynumber: 2.7 Consensus size: 16
276293 AGTCTACTGC
*
276303 ATATACTTATATATAT
1 ATATATTTATATATAT
276319 ATATATTTATATATAT
1 ATATATTTATATATAT
276335 ATAT-TTTATA
1 ATATATTTATA
276345 CGTCTAGCGA
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
15 6 0.24
16 19 0.76
ACGTcount: A:0.43, C:0.02, G:0.00, T:0.55
Consensus pattern (16 bp):
ATATATTTATATATAT
Left flanking sequence: Indices 275803 -- 276302
CCTTTTCCATCTTTTATGATTCCATTTTTGATTCGTGATTTAGACTCATGAATCATTCATTTTCA
TCGTCACTCTATTATATCTAGAAATATATTCTATAAAAAAAATGAGAAATTGATAGAATTATATT
CTCTTAGAAAATTCTATTAAATAATACAAAGTATAGGATTCTTTAGGTAAGTGATTGGTCTGACA
TAAACAGAAAAATCAAAAAATGTGTGTGTTTTTTATAAAAAAAGTTTGGTTGAGGGACAAATCAA
ATCTCTTCATTACATATTTTGATAAAATAGCTCGGATCTCTGTCAAATTGCTAAGGTACATATAT
CAATCAACTGAATTTCGTTCTGATGGAACAATTATGGTCAGTCTTGAAACAATTCATTGCATTGA
TATTTATCAAATCCAATATCAATAAACCAATTCGACCCTATTTATTAATTAAATTAAGTAAATTA
GAATCGCATTTCTGAATAAGCTAGTAGATACTACGAGTCTACTGC
Right flanking sequence: Indices 276345 -- 276844
CGTCTAGCGATTCATTCAGTAATTGAATCAAATGGCCCTTTTAACTCAGTGGTAGAGTAACGCCA
TGGTAAGGCGTAAGTCATCGGTTCAAATCCGATAGGGGGCTTTTTCTTTTTTCATTTTTAATTGA
CATAGACACAAGTCCTCTATAAAAATGAGGATGATGTCTTGGTAATGGTCGGGATAGCTCAGCTG
GTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAGTTCAAATCTGGTTCTCGACATATGATTAAT
TCATATGAGGATCTATTCTACAAATTCATTGATATGGATCAACATAATACATAGTTATCCCTCTG
GGTGTCTGTAAATGTACCTTTTTCTATTTTGTAGTTATTTTCTATTTTATAGAAGTTCTTTTCTA
TTTTATAGATTAGTAAAGAGTCTATTATATTATATATGTAGTGAAAGAAAAAAATTGGATTCTCT
TTTCTCTTCCTTCTAAGTGATGTGCGCGATACAAAGTTCACGGCA
Found at i:276329 original size:14 final size:14
Alignment explanation
Indices: 276312--276344 Score: 59
Period size: 14 Copynumber: 2.4 Consensus size: 14
276302 CATATACTTA
276312 TATATATATATATT
1 TATATATATATATT
276326 TATATATATATATT
1 TATATATATATATT
276340 T-TATA
1 TATATA
276345 CGTCTAGCGA
Statistics
Matches: 19, Mismatches: 0, Indels: 1
0.95 0.00 0.05
Matches are distributed among these distances:
13 4 0.21
14 15 0.79
ACGTcount: A:0.42, C:0.00, G:0.00, T:0.58
Consensus pattern (14 bp):
TATATATATATATT
Left flanking sequence: Indices 275812 -- 276311
TCTTTTATGATTCCATTTTTGATTCGTGATTTAGACTCATGAATCATTCATTTTCATCGTCACTC
TATTATATCTAGAAATATATTCTATAAAAAAAATGAGAAATTGATAGAATTATATTCTCTTAGAA
AATTCTATTAAATAATACAAAGTATAGGATTCTTTAGGTAAGTGATTGGTCTGACATAAACAGAA
AAATCAAAAAATGTGTGTGTTTTTTATAAAAAAAGTTTGGTTGAGGGACAAATCAAATCTCTTCA
TTACATATTTTGATAAAATAGCTCGGATCTCTGTCAAATTGCTAAGGTACATATATCAATCAACT
GAATTTCGTTCTGATGGAACAATTATGGTCAGTCTTGAAACAATTCATTGCATTGATATTTATCA
AATCCAATATCAATAAACCAATTCGACCCTATTTATTAATTAAATTAAGTAAATTAGAATCGCAT
TTCTGAATAAGCTAGTAGATACTACGAGTCTACTGCATATACTTA
Right flanking sequence: Indices 276345 -- 276844
CGTCTAGCGATTCATTCAGTAATTGAATCAAATGGCCCTTTTAACTCAGTGGTAGAGTAACGCCA
TGGTAAGGCGTAAGTCATCGGTTCAAATCCGATAGGGGGCTTTTTCTTTTTTCATTTTTAATTGA
CATAGACACAAGTCCTCTATAAAAATGAGGATGATGTCTTGGTAATGGTCGGGATAGCTCAGCTG
GTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAGTTCAAATCTGGTTCTCGACATATGATTAAT
TCATATGAGGATCTATTCTACAAATTCATTGATATGGATCAACATAATACATAGTTATCCCTCTG
GGTGTCTGTAAATGTACCTTTTTCTATTTTGTAGTTATTTTCTATTTTATAGAAGTTCTTTTCTA
TTTTATAGATTAGTAAAGAGTCTATTATATTATATATGTAGTGAAAGAAAAAAATTGGATTCTCT
TTTCTCTTCCTTCTAAGTGATGTGCGCGATACAAAGTTCACGGCA
Found at i:276731 original size:21 final size:21
Alignment explanation
Indices: 276702--276743 Score: 75
Period size: 21 Copynumber: 2.0 Consensus size: 21
276692 TCTATTTTGT
276702 AGTTATTTTCTATTTTATAGA
1 AGTTATTTTCTATTTTATAGA
*
276723 AGTTCTTTTCTATTTTATAGA
1 AGTTATTTTCTATTTTATAGA
276744 TTAGTAAAGA
Statistics
Matches: 20, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
21 20 1.00
ACGTcount: A:0.26, C:0.07, G:0.10, T:0.57
Consensus pattern (21 bp):
AGTTATTTTCTATTTTATAGA
Left flanking sequence: Indices 276202 -- 276701
AATCCAATATCAATAAACCAATTCGACCCTATTTATTAATTAAATTAAGTAAATTAGAATCGCAT
TTCTGAATAAGCTAGTAGATACTACGAGTCTACTGCATATACTTATATATATATATATTTATATA
TATATATTTTATACGTCTAGCGATTCATTCAGTAATTGAATCAAATGGCCCTTTTAACTCAGTGG
TAGAGTAACGCCATGGTAAGGCGTAAGTCATCGGTTCAAATCCGATAGGGGGCTTTTTCTTTTTT
CATTTTTAATTGACATAGACACAAGTCCTCTATAAAAATGAGGATGATGTCTTGGTAATGGTCGG
GATAGCTCAGCTGGTAGAGCAGAGGACTGAAAATCCTCGTGTCACCAGTTCAAATCTGGTTCTCG
ACATATGATTAATTCATATGAGGATCTATTCTACAAATTCATTGATATGGATCAACATAATACAT
AGTTATCCCTCTGGGTGTCTGTAAATGTACCTTTTTCTATTTTGT
Right flanking sequence: Indices 276744 -- 277243
TTAGTAAAGAGTCTATTATATTATATATGTAGTGAAAGAAAAAAATTGGATTCTCTTTTCTCTTC
CTTCTAAGTGATGTGCGCGATACAAAGTTCACGGCACAGAACCCCTTTTATTTTAGTTCATCCTA
TCGGCTCGCCTCGCCTAAAAAAAAAGAATCTATCTTTAACAAGTTGAGAATCTTAATGAATCCCT
AATTATATTATATATACTAAACCACCAATAGCGGGAGAGCCGACATTACTATAGAATGATAGATG
TGCAGCGCATTATGTAAGGCTAACAACTCATTCTCTAACTGGAAAAGCAAAGACCTCATCTACCG
CATCAACACCCGCATCTGATAAGGCAAGTCTCCTTCCCGGAGCCACTGCTTCTCTACTACTGACT
GAAATGATTAAGTATCAAATCTCTCGAATTAGAAATTCTGGATTATTATGTAGGTCACCTACACT
TGTTGCCTACCCTACCTTTATCTATTTCGGGACAGCGAAGTACCT
Found at i:286553 original size:150 final size:150
Alignment explanation
Indices: 286282--286581 Score: 600
Period size: 150 Copynumber: 2.0 Consensus size: 150
286272 ATAAAGAGGA
286282 TCAGATGAATTGGGGAAGTCAGAGTTGGGATCTGACATCGTTCTATTCCCTTCATTTATCTTTAT
1 TCAGATGAATTGGGGAAGTCAGAGTTGGGATCTGACATCGTTCTATTCCCTTCATTTATCTTTAT
286347 CTTTTAGAAGGTTCCTACCCTCTGGGTATGTCCTTCTCCTCCGGCGCACTATGCTATCCTTTTCT
66 CTTTTAGAAGGTTCCTACCCTCTGGGTATGTCCTTCTCCTCCGGCGCACTATGCTATCCTTTTCT
286412 ACGTAATTCTTTCTTTCCGG
131 ACGTAATTCTTTCTTTCCGG
286432 TCAGATGAATTGGGGAAGTCAGAGTTGGGATCTGACATCGTTCTATTCCCTTCATTTATCTTTAT
1 TCAGATGAATTGGGGAAGTCAGAGTTGGGATCTGACATCGTTCTATTCCCTTCATTTATCTTTAT
286497 CTTTTAGAAGGTTCCTACCCTCTGGGTATGTCCTTCTCCTCCGGCGCACTATGCTATCCTTTTCT
66 CTTTTAGAAGGTTCCTACCCTCTGGGTATGTCCTTCTCCTCCGGCGCACTATGCTATCCTTTTCT
286562 ACGTAATTCTTTCTTTCCGG
131 ACGTAATTCTTTCTTTCCGG
286582 GAGGTCGGTC
Statistics
Matches: 150, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
150 150 1.00
ACGTcount: A:0.17, C:0.25, G:0.19, T:0.39
Consensus pattern (150 bp):
TCAGATGAATTGGGGAAGTCAGAGTTGGGATCTGACATCGTTCTATTCCCTTCATTTATCTTTAT
CTTTTAGAAGGTTCCTACCCTCTGGGTATGTCCTTCTCCTCCGGCGCACTATGCTATCCTTTTCT
ACGTAATTCTTTCTTTCCGG
Left flanking sequence: Indices 285782 -- 286281
CACCCTTCACTCCTCTTTCAGCTGACTTCAGAAGTCTTCTGTCTAGCTAGCTTCGCTAACCTTTT
CTGTTGTGACAACAAGATTTTCTTATGTAGCTTCTCCGTTCCCAGGAGCTTCGAAGTCCTCGGCT
TTTATAATCCCAGCTCTTGCAACCGTACTTGTACTGGGATATTATAAAGGCTGTATTTACTTTAC
ACCACCTACAAGCTTCGGAAGGTGGAGATTCTTTTTAGGAAGTGTCAAAGATGTCGCCATCTTCT
TGCTTGGGGTTGGGACTTTACACTCGGGGCTTTTGCGGCTACTGTCGGGGGTTTGGGTTTGACCT
ATGTTTGCTTTAACGACCATTTTCAGTCGGTTAACTATTTGCTTTATCATTTGGATATTAGGTTG
TTTTTTTGTATCCCGTCTCTCTCTTTGAGAGACTCAGGACTCGACACTCGTGTTTTTCGTTCAAA
CCATGCGGTTTTCTTTTCTTTTCTGCTAAGCGAAAATAAAGAGGA
Right flanking sequence: Indices 286582 -- 287081
GAGGTCGGTCTCCCAACTCTTTGCACTCAGTTACTTCTCTTACTCACCCCCGGCACACTTGTGAG
ATCTCCTTCCTAACTAAAGCTCGCCTTACTTCTAAGCCAGAACTCTTTTGAAGCTTCAGTCTTGT
TTTCCTGGCTCTCCTCCCGGCTTGAAAGCTCCTTGCCGCTTTATCATTCAGAAGACTCGGGGAGG
TTCACGAATAGAACATTCATACAGGGAAGCCCTCGGCCTTTGAGAGGAGCTTGTTCGTAGGCTTC
ATTCGAATCAATCAGTAGAGGGAGGATTCTCTTTTCTTTCGAAGCGCTCCTATAGCACTTCTTCA
GCTCATAAAAAAAAGAAGTCAGCTTATGAGTTGGAAATGCCTTCCAGTTTGTCTTTCACTCTGTC
AGTCAAAAAAACAGCTTTCCTTTCTTATTGTCCCTCATAAAGTCTGTCCAGTCAAGTCCTTGCTC
TTCTCATATCTGTTCTTCTCTTTGAAAGAATAGACTCTGGGACTG
Done.